PDB entry 4wzl

View 4wzl on RCSB PDB site
Description: Crystal structure of P domain from norovirus strain Saga4 in complex with HBGA type Lea (triglycan)
Class: viral protein
Keywords: Viral capsid protein, Protruding domain, viral protein
Deposited on 2014-11-20, released 2014-12-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: vp1
    Species: Norovirus Hu/GII-4/Saga4/2006/JP [TaxId:546981]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B5BTR7 (2-307)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d4wzla1, d4wzla2
  • Chain 'B':
    Compound: vp1
    Species: Norovirus Hu/GII-4/Saga4/2006/JP [TaxId:546981]
    Database cross-references and differences (RAF-indexed):
    • Uniprot B5BTR7 (2-307)
      • expression tag (0-1)
    Domains in SCOPe 2.08: d4wzlb1, d4wzlb2
  • Heterogens: EDO, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4wzlA (A:)
gskpftvpiltveemtnsrfpipleklftgpsgafvvqpqngrcttdgvllgttqlspvn
ictfrgdvthiagsrnytmnlaslnwnnydpteeipaplgtpdfvgkiqglltqttkgdg
strghkatvytgsapftpklgsvqfstdtendfethqntkftpvgviqdgstthrnepqq
wvlpsysgrnvhnvhlapavaptfpgeqllffrstmpgcsgypnmdldcllpqewvqhfy
qeaapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvn
qfytlapm

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4wzlB (B:)
gskpftvpiltveemtnsrfpipleklftgpsgafvvqpqngrcttdgvllgttqlspvn
ictfrgdvthiagsrnytmnlaslnwnnydpteeipaplgtpdfvgkiqglltqttkgdg
strghkatvytgsapftpklgsvqfstdtendfethqntkftpvgviqdgstthrnepqq
wvlpsysgrnvhnvhlapavaptfpgeqllffrstmpgcsgypnmdldcllpqewvqhfy
qeaapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvn
qfytlapm