PDB entry 4wsr

View 4wsr on RCSB PDB site
Description: The crystal structure of hemagglutinin form A/chicken/New York/14677-13/1998
Class: viral protein
Keywords: Influenza virus, hemagglutinin, H6, VIRAL PROTEIN
Deposited on 2014-10-28, released 2015-02-25
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-02-25, with a file datestamp of 2015-02-20.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.212
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/chicken/New York/14677-13/1998(H6N2)) [TaxId:402503]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0A3A5 (4-End)
      • conflict (320)
    Domains in SCOPe 2.05: d4wsra1, d4wsra2
  • Chain 'B':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/chicken/New York/14677-13/1998(H6N2)) [TaxId:402503]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0A3A5 (4-End)
      • conflict (320)
    Domains in SCOPe 2.05: d4wsrb1, d4wsrb2
  • Chain 'C':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/chicken/New York/14677-13/1998(H6N2)) [TaxId:402503]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0A3A5 (4-End)
      • conflict (320)
    Domains in SCOPe 2.05: d4wsrc1, d4wsrc2
  • Chain 'D':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/chicken/New York/14677-13/1998(H6N2)) [TaxId:402503]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0A3A5 (4-End)
      • conflict (320)
    Domains in SCOPe 2.05: d4wsrd1, d4wsrd2
  • Chain 'E':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/chicken/New York/14677-13/1998(H6N2)) [TaxId:402503]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0A3A5 (4-End)
      • conflict (320)
    Domains in SCOPe 2.05: d4wsre1, d4wsre2
  • Chain 'F':
    Compound: Hemagglutinin
    Species: Influenza A virus (A/chicken/New York/14677-13/1998(H6N2)) [TaxId:402503]
    Gene: HA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0A3A5 (4-End)
      • conflict (320)
    Domains in SCOPe 2.05: d4wsrf1, d4wsrf2
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4wsrA (A:)
adpgdkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdct
tegwilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfem
fpkstwtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyf
wgvhhppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkp
getlnvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnv
spiwigecpkyvkskslklatglrnvpqvktrglfgaiagfieggwtgmvdgwygyhhen
sqgsgyaadkestqkaidgitnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgf
ldvwtynaellvllenertldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnec
insvkngtynypkyqeesrlnrqeiksgrlvprg

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsrA (A:)
dkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdcttegw
ilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfemfpks
twtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyfwgvh
hppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkpgetl
nvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnvspiw
igecpkyvkskslklatglrnvpqggwtgmvdgwygyhhensqgsgyaadkestqkaidg
itnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgfldvwtynaellvllenert
ldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnecinsvkngtynypkyqeesr
lnr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4wsrB (B:)
adpgdkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdct
tegwilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfem
fpkstwtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyf
wgvhhppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkp
getlnvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnv
spiwigecpkyvkskslklatglrnvpqvktrglfgaiagfieggwtgmvdgwygyhhen
sqgsgyaadkestqkaidgitnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgf
ldvwtynaellvllenertldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnec
insvkngtynypkyqeesrlnrqeiksgrlvprg

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsrB (B:)
dkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdcttegw
ilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfemfpks
twtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyfwgvh
hppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkpgetl
nvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnvspiw
igecpkyvkskslklatglrnvpggwtgmvdgwygyhhensqgsgyaadkestqkaidgi
tnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgfldvwtynaellvllenertl
dmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnecinsvkngtynypkyqeesrl
nr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4wsrC (C:)
adpgdkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdct
tegwilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfem
fpkstwtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyf
wgvhhppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkp
getlnvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnv
spiwigecpkyvkskslklatglrnvpqvktrglfgaiagfieggwtgmvdgwygyhhen
sqgsgyaadkestqkaidgitnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgf
ldvwtynaellvllenertldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnec
insvkngtynypkyqeesrlnrqeiksgrlvprg

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsrC (C:)
dkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdcttegw
ilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfemfpks
twtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyfwgvh
hppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkpgetl
nvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnvspiw
igecpkyvkskslklatglrnvpggwtgmvdgwygyhhensqgsgyaadkestqkaidgi
tnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgfldvwtynaellvllenertl
dmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnecinsvkngtynypkyqeesrl
nr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4wsrD (D:)
adpgdkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdct
tegwilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfem
fpkstwtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyf
wgvhhppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkp
getlnvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnv
spiwigecpkyvkskslklatglrnvpqvktrglfgaiagfieggwtgmvdgwygyhhen
sqgsgyaadkestqkaidgitnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgf
ldvwtynaellvllenertldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnec
insvkngtynypkyqeesrlnrqeiksgrlvprg

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsrD (D:)
dkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdcttegw
ilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfemfpks
twtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyfwgvh
hppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkpgetl
nvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnvspiw
igecpkyvkskslklatglrnvpqvktrglfgaiagfieggwtgmvdgwygyhhensqgs
gyaadkestqkaidgitnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgfldvw
tynaellvllenertldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnecinsv
kngtynypkyqeesrlnr

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4wsrE (E:)
adpgdkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdct
tegwilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfem
fpkstwtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyf
wgvhhppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkp
getlnvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnv
spiwigecpkyvkskslklatglrnvpqvktrglfgaiagfieggwtgmvdgwygyhhen
sqgsgyaadkestqkaidgitnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgf
ldvwtynaellvllenertldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnec
insvkngtynypkyqeesrlnrqeiksgrlvprg

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsrE (E:)
dkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdcttegw
ilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfemfpks
twtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyfwgvh
hppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkpgetl
nvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnvspiw
igecpkyvkskslklatglrnvpqiagfieggwtgmvdgwygyhhensqgsgyaadkest
qkaidgitnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgfldvwtynaellvl
lenertldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnecinsvkngtynypk
yqeesrlnr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4wsrF (F:)
adpgdkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdct
tegwilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfem
fpkstwtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyf
wgvhhppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkp
getlnvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnv
spiwigecpkyvkskslklatglrnvpqvktrglfgaiagfieggwtgmvdgwygyhhen
sqgsgyaadkestqkaidgitnkvnsiidkmntqfeavehefsnlekrisnlnkrmedgf
ldvwtynaellvllenertldmhdanvknlhekvksqlrdnakdlgngcfefwhkcdnec
insvkngtynypkyqeesrlnrqeiksgrlvprg

    Sequence, based on observed residues (ATOM records): (download) 
    >4wsrF (F:)
dkicigyhannsttqvdtileknvtvthsvelletqkesrfcrvlnkapldlgdcttegw
ilgnprcdkllgdrswsyiverpdaqngicypgvlkeaeelkaligsidtiqrfemfpks
twtgvdtnsgvtsactynggssfyrnllwiikirsdpyslikgtytntgsqsilyfwgvh
hppddveqanlyglgtryvrmgtesmnfakgpeiadrppangqrgridyywsvlkpgetl
nvesngnliapwyaykftssrhkgaifrsdlpiencdavcqtltgaintnktfqnvspiw
igecpkyvkskslklatglrnvggwtgmvdgwygyhhensqgsgyaadkestqkaidgit
nkvnsiidkmntqfeavehefsnlekrisnlnkrmedgfldvwtynaellvllenertld
mhdanvknlhekvksqlrdnakdlgngcfefwhkcdnecinsvkngtynypkyqeesrln
r