PDB entry 4w7j

View 4w7j on RCSB PDB site
Description: crystal structure of a decolorizing peroxidase (dyp) from auricularia auricula-judae
Class: oxidoreductase
Keywords: decolorizing peroxidase (dyp), oxidoreductase, heme
Deposited on 2014-08-22, released 2015-03-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-03-11, with a file datestamp of 2015-03-06.
Experiment type: XRAY
Resolution: 1.79 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dye-decolorizing peroxidase
    Species: Auricularia auricula-judae [TaxId:29892]
    Gene: dyp1
    Database cross-references and differences (RAF-indexed):
    • Uniprot I2DBY1 (Start-448)
      • engineered mutation (7)
    Domains in SCOPe 2.07: d4w7ja_
  • Chain 'B':
    Compound: dye-decolorizing peroxidase
    Species: Auricularia auricula-judae [TaxId:29892]
    Gene: dyp1
    Database cross-references and differences (RAF-indexed):
    • Uniprot I2DBY1 (Start-448)
      • engineered mutation (7)
    Domains in SCOPe 2.07: d4w7jb_
  • Chain 'C':
    Compound: dye-decolorizing peroxidase
    Species: Auricularia auricula-judae [TaxId:29892]
    Gene: dyp1
    Database cross-references and differences (RAF-indexed):
    • Uniprot I2DBY1 (Start-448)
      • engineered mutation (7)
    Domains in SCOPe 2.07: d4w7jc_
  • Chain 'D':
    Compound: dye-decolorizing peroxidase
    Species: Auricularia auricula-judae [TaxId:29892]
    Gene: dyp1
    Database cross-references and differences (RAF-indexed):
    • Uniprot I2DBY1 (Start-448)
      • engineered mutation (7)
    Domains in SCOPe 2.07: d4w7jd_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4w7jA (A:)
matslntidiqgdilvgmhkqkqlfyffaindpatfkthlasdiapvvasvtqlsnvatq
plvalniafsntgllalgvtdnlgdslfangqakdatsfkestsswvpqfagtgihgvii
lasdttdlidqqvasiestfgssisklyslsasirpgneaghemfgfldgiaqpaingfn
tplpgqnivdagviitgatndpitrpswavggsflafrqleqlvpefnkylldnapagsg
slqaradllgarmvgrwksgapidltptaddpalgadaqrnnnftyshagfdlgsdqshc
pfsahirktrpradlggsltppnlsagansimrsgipygpevtsaesasntttqerglaf
vayqaqlsqgfhflqqtwadnanfppgktpatvgldpiigqnngqprvvngllpsnssas
lsipqfvvshggeyffsppisaiggrlsa

    Sequence, based on observed residues (ATOM records): (download) 
    >4w7jA (A:)
lntidiqgdilvgmhkqkqlfyffaindpatfkthlasdiapvvasvtqlsnvatqplva
lniafsntgllalgvtdnlgdslfangqakdatsfkestsswvpqfagtgihgviilasd
ttdlidqqvasiestfgssisklyslsasirpgneaghemfgfldgiaqpaingfntplp
gqnivdagviitgatndpitrpswavggsflafrqleqlvpefnkylldnapagsgslqa
radllgarmvgrwksgapidltptaddpalgadaqrnnnftyshagfdlgsdqshcpfsa
hirktrpradlggsltppnlsagansimrsgipygpevtsaesasntttqerglafvayq
aqlsqgfhflqqtwadnanfppgktpatvgldpiigqnngqprvvngllpsnssaslsip
qfvvshggeyffsppisaiggrlsa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4w7jB (B:)
matslntidiqgdilvgmhkqkqlfyffaindpatfkthlasdiapvvasvtqlsnvatq
plvalniafsntgllalgvtdnlgdslfangqakdatsfkestsswvpqfagtgihgvii
lasdttdlidqqvasiestfgssisklyslsasirpgneaghemfgfldgiaqpaingfn
tplpgqnivdagviitgatndpitrpswavggsflafrqleqlvpefnkylldnapagsg
slqaradllgarmvgrwksgapidltptaddpalgadaqrnnnftyshagfdlgsdqshc
pfsahirktrpradlggsltppnlsagansimrsgipygpevtsaesasntttqerglaf
vayqaqlsqgfhflqqtwadnanfppgktpatvgldpiigqnngqprvvngllpsnssas
lsipqfvvshggeyffsppisaiggrlsa

    Sequence, based on observed residues (ATOM records): (download) 
    >4w7jB (B:)
tslntidiqgdilvgmhkqkqlfyffaindpatfkthlasdiapvvasvtqlsnvatqpl
valniafsntgllalgvtdnlgdslfangqakdatsfkestsswvpqfagtgihgviila
sdttdlidqqvasiestfgssisklyslsasirpgneaghemfgfldgiaqpaingfntp
lpgqnivdagviitgatndpitrpswavggsflafrqleqlvpefnkylldnapagsgsl
qaradllgarmvgrwksgapidltptaddpalgadaqrnnnftyshagfdlgsdqshcpf
sahirktrpradlggsltppnlsagansimrsgipygpevtsaesasntttqerglafva
yqaqlsqgfhflqqtwadnanfppgktpatvgldpiigqnngqprvvngllpsnssasls
ipqfvvshggeyffsppisaiggrlsa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4w7jC (C:)
matslntidiqgdilvgmhkqkqlfyffaindpatfkthlasdiapvvasvtqlsnvatq
plvalniafsntgllalgvtdnlgdslfangqakdatsfkestsswvpqfagtgihgvii
lasdttdlidqqvasiestfgssisklyslsasirpgneaghemfgfldgiaqpaingfn
tplpgqnivdagviitgatndpitrpswavggsflafrqleqlvpefnkylldnapagsg
slqaradllgarmvgrwksgapidltptaddpalgadaqrnnnftyshagfdlgsdqshc
pfsahirktrpradlggsltppnlsagansimrsgipygpevtsaesasntttqerglaf
vayqaqlsqgfhflqqtwadnanfppgktpatvgldpiigqnngqprvvngllpsnssas
lsipqfvvshggeyffsppisaiggrlsa

    Sequence, based on observed residues (ATOM records): (download) 
    >4w7jC (C:)
lntidiqgdilvgmhkqkqlfyffaindpatfkthlasdiapvvasvtqlsnvatqplva
lniafsntgllalgvtdnlgdslfangqakdatsfkestsswvpqfagtgihgviilasd
ttdlidqqvasiestfgssisklyslsasirpgneaghemfgfldgiaqpaingfntplp
gqnivdagviitgatndpitrpswavggsflafrqleqlvpefnkylldnapagsgslqa
radllgarmvgrwksgapidltptaddpalgadaqrnnnftyshagfdlgsdqshcpfsa
hirktrpradlggsltppnlsagansimrsgipygpevtsaesasntttqerglafvayq
aqlsqgfhflqqtwadnanfppgktpatvgldpiigqnngqprvvngllpsnssaslsip
qfvvshggeyffsppisaiggrlsa

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4w7jD (D:)
matslntidiqgdilvgmhkqkqlfyffaindpatfkthlasdiapvvasvtqlsnvatq
plvalniafsntgllalgvtdnlgdslfangqakdatsfkestsswvpqfagtgihgvii
lasdttdlidqqvasiestfgssisklyslsasirpgneaghemfgfldgiaqpaingfn
tplpgqnivdagviitgatndpitrpswavggsflafrqleqlvpefnkylldnapagsg
slqaradllgarmvgrwksgapidltptaddpalgadaqrnnnftyshagfdlgsdqshc
pfsahirktrpradlggsltppnlsagansimrsgipygpevtsaesasntttqerglaf
vayqaqlsqgfhflqqtwadnanfppgktpatvgldpiigqnngqprvvngllpsnssas
lsipqfvvshggeyffsppisaiggrlsa

    Sequence, based on observed residues (ATOM records): (download) 
    >4w7jD (D:)
slntidiqgdilvgmhkqkqlfyffaindpatfkthlasdiapvvasvtqlsnvatqplv
alniafsntgllalgvtdnlgdslfangqakdatsfkestsswvpqfagtgihgviilas
dttdlidqqvasiestfgssisklyslsasirpgneaghemfgfldgiaqpaingfntpl
pgqnivdagviitgatndpitrpswavggsflafrqleqlvpefnkylldnapagsgslq
aradllgarmvgrwksgapidltptaddpalgadaqrnnnftyshagfdlgsdqshcpfs
ahirktrpradlggsltppnlsagansimrsgipygpevtsaesasntttqerglafvay
qaqlsqgfhflqqtwadnanfppgktpatvgldpiigqnngqprvvngllpsnssaslsi
pqfvvshggeyffsppisaiggrlsa