PDB entry 4w5v

View 4w5v on RCSB PDB site
Description: Crystal structure of Human SUMO E2-conjugating enzyme (Ubc9) in complex with E1-activating enzyme (Uba2) ubiquitin fold domain (Ufd)
Class: ligase
Keywords: SUMO, E2-activating enzyme, Ubc9, E1-conjugating enzyme, Uba2, ubiquitin fold domain, Ufd, ubiquitin, LIGASE
Deposited on 2014-08-19, released 2015-09-09
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-09-09, with a file datestamp of 2015-09-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SUMO-conjugating enzyme UBC9
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2I, UBC9, UBCE9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4w5va_
  • Chain 'B':
    Compound: SUMO-activating enzyme subunit 2
    Species: Homo sapiens [TaxId:9606]
    Gene: UBA2, SAE2, UBLE1B, HRIHFB2115
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UBT2 (5-End)
      • expression tag (4)
  • Heterogens: FMT, GOL, K, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4w5vA (A:)
    gplgsmsgialsrlaqerkawrkdhpfgfvavptknpdgtmnlmnwecaipgkkgtpweg
    glfklrmlfkddypssppkckfepplfhpnvypsgtvclsileedkdwrpaitikqillg
    iqellnepniqdpaqaeaytiycqnrveyekrvraqakkfaps
    

    Sequence, based on observed residues (ATOM records): (download)
    >4w5vA (A:)
    msgialsrlaqerkawrkdhpfgfvavptknpdgtmnlmnwecaipgkkgtpwegglfkl
    rmlfkddypssppkckfepplfhpnvypsgtvclsileedkdwrpaitikqillgiqell
    nepniqdpaqaeaytiycqnrveyekrvraqakkfaps
    

  • Chain 'B':
    No sequence available.