PDB entry 4up2

View 4up2 on RCSB PDB site
Description: Crystal structure of Escherichia coli tryptophanase purified from alkaline stressed bacterial culture.
Class: lyase
Keywords: lyase, alkaline stress, protein purification
Deposited on 2014-06-11, released 2015-06-24
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-06-24, with a file datestamp of 2015-06-19.
Experiment type: XRAY
Resolution: 2.78 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: tryptophanase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4up2a_
  • Chain 'B':
    Compound: tryptophanase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4up2b_
  • Chain 'C':
    Compound: tryptophanase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4up2c_
  • Chain 'D':
    Compound: tryptophanase
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4up2d_
  • Heterogens: SO4, BME, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4up2A (A:)
    menfkhlpepfrirviepvkrttrayreeaiiksgmnpflldsedvfidlltdsgtgavt
    qsmqaammrgdeaysgsrsyyalaesvknifgyqytipthqgrgaeqiyipvlikkreqe
    kgldrskmvafsnyffdttqghsqingctvrnvyikeafdtgvrydfkgnfdleglergi
    eevgpnnvpyivatitsnsaggqpvslanlkamysiakkydipvvmdsarfaenayfikq
    reaeykdwtieqitretykyadmlamsakkdamvpmggllcmkddsffdvytecrtlcvv
    qegfptyggleggamerlavglydgmnldwlayriaqvqylvdgleeigvvcqqagghaa
    fvdagkllphipadqfpaqalacelykvagiraveigsfllgrdpktgkqlpcpaellrl
    tipratytqthmdfiieafkhvkenasnikgltftyepkvlrhftaklkev
    

    Sequence, based on observed residues (ATOM records): (download)
    >4up2A (A:)
    menfkhlpepfrirviepvkrttrayreeaiiksgmnpflldsedvfidlltdsgtgavt
    qsmqaammrgdeaysgsrsyyalaesvknifgyqytipthqgrgaeqiyipvlikkreqe
    kgldrskmvafsnyfctvrnvyikeafdtgvrydfkgnfdleglergieevgpnnvpyiv
    atitsnsaggqpvslanlkamysiakkydipvvmdsarfaenayfikqreaeykdwtieq
    itretykyadmlamsakkdamvpmggllcmkddsffgleggamerlavglydgmnldwla
    yriaqvqylvdgleeigvvcqqagghaafvdagkllphipadqfpaqalacelykvagir
    aveigpaellrltipratytqthmdfiieafkhvkenasnikgltftyepkvlrhftakl
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4up2B (B:)
    menfkhlpepfrirviepvkrttrayreeaiiksgmnpflldsedvfidlltdsgtgavt
    qsmqaammrgdeaysgsrsyyalaesvknifgyqytipthqgrgaeqiyipvlikkreqe
    kgldrskmvafsnyffdttqghsqingctvrnvyikeafdtgvrydfkgnfdleglergi
    eevgpnnvpyivatitsnsaggqpvslanlkamysiakkydipvvmdsarfaenayfikq
    reaeykdwtieqitretykyadmlamsakkdamvpmggllcmkddsffdvytecrtlcvv
    qegfptyggleggamerlavglydgmnldwlayriaqvqylvdgleeigvvcqqagghaa
    fvdagkllphipadqfpaqalacelykvagiraveigsfllgrdpktgkqlpcpaellrl
    tipratytqthmdfiieafkhvkenasnikgltftyepkvlrhftaklkev
    

    Sequence, based on observed residues (ATOM records): (download)
    >4up2B (B:)
    enfkhlpepfrirviepvkrttrayreeaiiksgmnpflldsedvfidlltdsgtgavtq
    smqaammrgdeaysgsrsyyalaesvknifgyqytipthqgrgaeqiyipvlikkreqek
    gldrskmvafsnyfctvrnvyikeafdtgvrydfkgnfdleglergieevgpnnvpyiva
    titsnsaggqpvslanlkamysiakkydipvvmdsarfaenayfikqreaeykdwtieqi
    tretykyadmlamsakkdamvpmggllcmkddsffdyggleggamerlavglydgmnldw
    layriaqvqylvdgleeigvvcqqagghaafvdagkllphipadqfpaqalacelykvag
    iraveigsfaellrltipratytqthmdfiieafkhvkenasnikglt
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4up2C (C:)
    menfkhlpepfrirviepvkrttrayreeaiiksgmnpflldsedvfidlltdsgtgavt
    qsmqaammrgdeaysgsrsyyalaesvknifgyqytipthqgrgaeqiyipvlikkreqe
    kgldrskmvafsnyffdttqghsqingctvrnvyikeafdtgvrydfkgnfdleglergi
    eevgpnnvpyivatitsnsaggqpvslanlkamysiakkydipvvmdsarfaenayfikq
    reaeykdwtieqitretykyadmlamsakkdamvpmggllcmkddsffdvytecrtlcvv
    qegfptyggleggamerlavglydgmnldwlayriaqvqylvdgleeigvvcqqagghaa
    fvdagkllphipadqfpaqalacelykvagiraveigsfllgrdpktgkqlpcpaellrl
    tipratytqthmdfiieafkhvkenasnikgltftyepkvlrhftaklkev
    

    Sequence, based on observed residues (ATOM records): (download)
    >4up2C (C:)
    fkhlpepfrirviepvkrttrayreeaiiksgmnpflldsedvfidlltdsgtgavtqsm
    qaammrgdeaysgsrsyyalaesvknifgyqytipthqgrgaeqiyipvlikkreqekgl
    drskmvafsnyfftvrnvyikeafdtgvrydfkgnfdleglergieevgpnnvpyivati
    tsnsaggqpvslanlkamysiakkydipvvmdsarfaenayfikqreaeykdwtieqitr
    etykyadmlamsakkdamvpmggllcmkddsffgleggamerlavglydgmnldwlayri
    aqvqylvdgleeigvvcqqagghaafvdagkllphipadqfpaqalacelykvagirave
    igspaellrltipratytqthmdfiieafkhvkenasnikgltf
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4up2D (D:)
    menfkhlpepfrirviepvkrttrayreeaiiksgmnpflldsedvfidlltdsgtgavt
    qsmqaammrgdeaysgsrsyyalaesvknifgyqytipthqgrgaeqiyipvlikkreqe
    kgldrskmvafsnyffdttqghsqingctvrnvyikeafdtgvrydfkgnfdleglergi
    eevgpnnvpyivatitsnsaggqpvslanlkamysiakkydipvvmdsarfaenayfikq
    reaeykdwtieqitretykyadmlamsakkdamvpmggllcmkddsffdvytecrtlcvv
    qegfptyggleggamerlavglydgmnldwlayriaqvqylvdgleeigvvcqqagghaa
    fvdagkllphipadqfpaqalacelykvagiraveigsfllgrdpktgkqlpcpaellrl
    tipratytqthmdfiieafkhvkenasnikgltftyepkvlrhftaklkev
    

    Sequence, based on observed residues (ATOM records): (download)
    >4up2D (D:)
    enfkhlpepfrirviepvkrttrayreeaiiksgmnpflldsedvfidlltdsgtgavtq
    smqaammrgdeaysgsrsyyalaesvknifgyqytipthqgrgaeqiyipvlikkreqek
    gldrskmvafsnyfvrnvyikeafdtgvrydfkgnfdleglergieevgpnnvpyivati
    tsnsaggqpvslanlkamysiakkydipvvmdsarfaenayfikqreaeykdwtieqitr
    etykyadmlamsakkdamvpmggllcmkddsfleggamerlavglydgmnldwlayriaq
    vqylvdgleeigvvcqqagghaafvdagkllphipadqfpaqalacelykvagiraveel
    lrltipratytqthmdfiieafkhvkenasnikgltf