PDB entry 4uo7

View 4uo7 on RCSB PDB site
Description: Structure of the A_Canine_Colorado_17864_06 H3 haemagglutinin in complex with 6SO4 Sialyl Lewis X
Class: viral protein
Keywords: equine, canine, viral protein
Deposited on 2014-05-31, released 2014-07-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: haemagglutinin ha1
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4uo7a_
  • Chain 'B':
    Compound: haemagglutinin ha2
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed):
    • Uniprot E0UVR5 (0-171)
      • expression tag (172-173)
      • conflict (130)
    Domains in SCOPe 2.08: d4uo7b1, d4uo7b2
  • Chain 'C':
    Compound: haemagglutinin ha1
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4uo7c_
  • Chain 'D':
    Compound: haemagglutinin ha2
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed):
    • Uniprot E0UVR5 (0-171)
      • expression tag (172-174)
      • conflict (130)
    Domains in SCOPe 2.08: d4uo7d1, d4uo7d2
  • Chain 'E':
    Compound: haemagglutinin ha1
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4uo7e_
  • Chain 'F':
    Compound: haemagglutinin ha2
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed):
    • Uniprot E0UVR5 (0-171)
      • expression tag (172-173)
      • conflict (130)
    Domains in SCOPe 2.08: d4uo7f1, d4uo7f2
  • Heterogens: SO4, NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4uo7A (A:)
qnpisgnntatlclghhavangtlvktmsddqievtnatelvqsismgkicnksyrildg
rnctlidamlgdphcdafqyeswdlfiersnafsncypydipdyaslrsivassgtveft
aegftwtgvtqngrsgackrgsadsffsrlnwltksgssyptlnvtmpnnknfdklyiwg
ihhpssnqeqtklyiqesgrvtvstkrsqqtiipnigsrplvrgqsgrisiywtivkpgd
ilminsngnlvaprgyfklntgkssvmrsdvpidicvsecitpngsisndkpfqnvnkvt
ygkcpkyirqntlklatgmrnvpekqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >4uo7A (A:)
nntatlclghhavangtlvktmsddqievtnatelvqsismgkicnksyrildgrnctli
damlgdphcdafqyeswdlfiersnafsncypydipdyaslrsivassgtveftaegftw
tgvtqngrsgackrgsadsffsrlnwltksgssyptlnvtmpnnknfdklyiwgihhpss
nqeqtklyiqesgrvtvstkrsqqtiipnigsrplvrgqsgrisiywtivkpgdilmins
ngnlvaprgyfklntgkssvmrsdvpidicvsecitpngsisndkpfqnvnkvtygkcpk
yirqntlklatgmrnvpek

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4uo7B (B:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgdgcfkiyhkcdnaciesirtgtydhyiyrdealnnrfqsgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4uo7B (B:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgdgcfkiyhkcdnaciesirtgtydhyiyrdealnnrfqsg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4uo7C (C:)
qnpisgnntatlclghhavangtlvktmsddqievtnatelvqsismgkicnksyrildg
rnctlidamlgdphcdafqyeswdlfiersnafsncypydipdyaslrsivassgtveft
aegftwtgvtqngrsgackrgsadsffsrlnwltksgssyptlnvtmpnnknfdklyiwg
ihhpssnqeqtklyiqesgrvtvstkrsqqtiipnigsrplvrgqsgrisiywtivkpgd
ilminsngnlvaprgyfklntgkssvmrsdvpidicvsecitpngsisndkpfqnvnkvt
ygkcpkyirqntlklatgmrnvpekqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >4uo7C (C:)
nntatlclghhavangtlvktmsddqievtnatelvqsismgkicnksyrildgrnctli
damlgdphcdafqyeswdlfiersnafsncypydipdyaslrsivassgtveftaegftw
tgvtqngrsgackrgsadsffsrlnwltksgssyptlnvtmpnnknfdklyiwgihhpss
nqeqtklyiqesgrvtvstkrsqqtiipnigsrplvrgqsgrisiywtivkpgdilmins
ngnlvaprgyfklntgkssvmrsdvpidicvsecitpngsisndkpfqnvnkvtygkcpk
yirqntlklatgmrnvpek

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4uo7D (D:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgdgcfkiyhkcdnaciesirtgtydhyiyrdealnnrfqsgr

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4uo7E (E:)
qnpisgnntatlclghhavangtlvktmsddqievtnatelvqsismgkicnksyrildg
rnctlidamlgdphcdafqyeswdlfiersnafsncypydipdyaslrsivassgtveft
aegftwtgvtqngrsgackrgsadsffsrlnwltksgssyptlnvtmpnnknfdklyiwg
ihhpssnqeqtklyiqesgrvtvstkrsqqtiipnigsrplvrgqsgrisiywtivkpgd
ilminsngnlvaprgyfklntgkssvmrsdvpidicvsecitpngsisndkpfqnvnkvt
ygkcpkyirqntlklatgmrnvpekqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >4uo7E (E:)
nntatlclghhavangtlvktmsddqievtnatelvqsismgkicnksyrildgrnctli
damlgdphcdafqyeswdlfiersnafsncypydipdyaslrsivassgtveftaegftw
tgvtqngrsgackrgsadsffsrlnwltksgssyptlnvtmpnnknfdklyiwgihhpss
nqeqtklyiqesgrvtvstkrsqqtiipnigsrplvrgqsgrisiywtivkpgdilmins
ngnlvaprgyfklntgkssvmrsdvpidicvsecitpngsisndkpfqnvnkvtygkcpk
yirqntlklatgmrnvpek

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4uo7F (F:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgdgcfkiyhkcdnaciesirtgtydhyiyrdealnnrfqsgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4uo7F (F:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgdgcfkiyhkcdnaciesirtgtydhyiyrdealnnrfqsg