PDB entry 4uny

View 4uny on RCSB PDB site
Description: Structure of the A_Equine_Newmarket_2_93 H3 haemagglutinin in complex with 6SO4-3SLN
Class: viral protein
Keywords: viral protein, influenza
Deposited on 2014-05-31, released 2014-07-23
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-08-13, with a file datestamp of 2014-08-08.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.19383
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hay subunit of haemagglutinin
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4unya_
  • Chain 'B':
    Compound: h3 haemagglutinin ha2 chain
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed):
    • PDB 4UNY (0-172)
    Domains in SCOPe 2.05: d4unyb_
  • Chain 'C':
    Compound: hay subunit of haemagglutinin
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q82847 (2-329)
      • expression tag (0-1)
    Domains in SCOPe 2.05: d4unyc_
  • Chain 'D':
    Compound: h3 haemagglutinin ha2 chain
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed):
    • PDB 4UNY (0-End)
    Domains in SCOPe 2.05: d4unyd_
  • Chain 'E':
    Compound: hay subunit of haemagglutinin
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4unye_
  • Chain 'F':
    Compound: h3 haemagglutinin ha2 chain
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed):
    • PDB 4UNY (0-End)
    Domains in SCOPe 2.05: d4unyf_
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4unyA (A:)
pdqnptsgnntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvl
dgrnctlidamlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtle
ftaegftwtgvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyi
wgihhpssnkeqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkp
gdilminsngnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnk
itygkcpkyirqntlklatgmrnvpekqir

    Sequence, based on observed residues (ATOM records): (download) 
    >4unyA (A:)
ntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvldgrnctlid
amlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtleftaegftwt
gvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyiwgihhpssn
keqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkpgdilminsn
gnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnkitygkcpky
irqntlklatgmrnvpe

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4unyB (B:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfqi

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4unyC (C:)
pdqnptsgnntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvl
dgrnctlidamlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtle
ftaegftwtgvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyi
wgihhpssnkeqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkp
gdilminsngnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnk
itygkcpkyirqntlklatgmrnvpekqir

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4unyD (D:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfqi

    Sequence, based on observed residues (ATOM records): (download) 
    >4unyD (D:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfq

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4unyE (E:)
pdqnptsgnntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvl
dgrnctlidamlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtle
ftaegftwtgvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyi
wgihhpssnkeqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkp
gdilminsngnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnk
itygkcpkyirqntlklatgmrnvpekqir

    Sequence, based on observed residues (ATOM records): (download) 
    >4unyE (E:)
nntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvldgrnctli
damlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtleftaegftw
tgvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyiwgihhpss
nkeqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkpgdilmins
ngnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnkitygkcpk
yirqntlklatgmrnvpekqi

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4unyF (F:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfqi

    Sequence, based on observed residues (ATOM records): (download) 
    >4unyF (F:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfq