PDB entry 4um5
View 4um5 on RCSB PDB site
Description: Crystal structure of 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase from Moraxella catarrhalis in complex with Magnesium ion and Phosphate ion
Class: hydrolase
Keywords: hydrolase, had superfamily
Deposited on
2014-05-15, released
2015-02-11
The last revision prior to the SCOPe 2.08 freeze date was dated
2015-02-25, with a file datestamp of
2015-02-20.
Experiment type: XRAY
Resolution: 2.34 Å
R-factor: 0.19066
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Species: MORAXELLA CATARRHALIS BC8 [TaxId:857574]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4um5a_ - Chain 'B':
Compound: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Species: MORAXELLA CATARRHALIS BC8 [TaxId:857574]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4um5b_ - Chain 'C':
Compound: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Species: MORAXELLA CATARRHALIS BC8 [TaxId:857574]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4um5c_ - Chain 'D':
Compound: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC
Species: MORAXELLA CATARRHALIS BC8 [TaxId:857574]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4um5d_ - Heterogens: MG, PO4, EDO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4um5A (A:)
mgsshhhhhhssenlyfqghmneiyqkakhiklfamdvdgilsdgqiiynsegtetkafy
vqdglglqalkqsgiilaiitgrssamvdrrakelgishiiqgqddkltalvgltkklgi
elshcayigddlpdlkavreagfgisvpngceqtravsdyittktggngavrevcelilk
aqnnfdafiatfq
Sequence, based on observed residues (ATOM records): (download)
>4um5A (A:)
neiyqkakhiklfamdvdgilsdgqiiynsegtetkafyvqdglglqalkqsgiilaiit
grssamvdrrakelgishiiqgqddkltalvgltkklgielshcayigddlpdlkavrea
gfgisvpngceqtravsdyittktggngavrevcelilkaqnnfdafiatfq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4um5B (B:)
mgsshhhhhhssenlyfqghmneiyqkakhiklfamdvdgilsdgqiiynsegtetkafy
vqdglglqalkqsgiilaiitgrssamvdrrakelgishiiqgqddkltalvgltkklgi
elshcayigddlpdlkavreagfgisvpngceqtravsdyittktggngavrevcelilk
aqnnfdafiatfq
Sequence, based on observed residues (ATOM records): (download)
>4um5B (B:)
mneiyqkakhiklfamdvdgilsdgqiiynsegtetkafyvqdglglqalkqsgiilaii
tgrssamvdrrakelgishiiqgqddkltalvgltkklgielshcayigddlpdlkavre
agfgisvpngceqtravsdyittktggngavrevcelilkaqnnfdafiatfq
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4um5C (C:)
mgsshhhhhhssenlyfqghmneiyqkakhiklfamdvdgilsdgqiiynsegtetkafy
vqdglglqalkqsgiilaiitgrssamvdrrakelgishiiqgqddkltalvgltkklgi
elshcayigddlpdlkavreagfgisvpngceqtravsdyittktggngavrevcelilk
aqnnfdafiatfq
Sequence, based on observed residues (ATOM records): (download)
>4um5C (C:)
mneiyqkakhiklfamdvdgilsdgqiiynsegtetkafyvqdglglqalkqsgiilaii
tgrssamvdrrakelgishiiqgqddkltalvgltkklgielshcayigddlpdlkavre
agfgisvpngceqtravsdyittktggngavrevcelilkaqnnfdafiatfq
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4um5D (D:)
mgsshhhhhhssenlyfqghmneiyqkakhiklfamdvdgilsdgqiiynsegtetkafy
vqdglglqalkqsgiilaiitgrssamvdrrakelgishiiqgqddkltalvgltkklgi
elshcayigddlpdlkavreagfgisvpngceqtravsdyittktggngavrevcelilk
aqnnfdafiatfq
Sequence, based on observed residues (ATOM records): (download)
>4um5D (D:)
mneiyqkakhiklfamdvdgilsdgqiiynsegtetkafyvqdglglqalkqsgiilaii
tgrssamvdrrakelgishiiqgqddkltalvgltkklgielshcayigddlpdlkavre
agfgisvpngceqtravsdyittktggngavrevcelilkaqnnfdafiatfq