PDB entry 4uhp

View 4uhp on RCSB PDB site
Description: Crystal structure of the pyocin AP41 DNase-Immunity complex
Class: hydrolase
Keywords: hydrolase, bacteriocin, DNAse, pyocin, DNAse-im
Deposited on 2015-03-25, released 2015-08-05
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-09-02, with a file datestamp of 2015-08-28.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: large component of pyocin ap41
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4uhpa_
  • Chain 'B':
    Compound: bacteriocin immunity protein
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4uhpb_
  • Chain 'C':
    Compound: large component of pyocin ap41
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4uhpc_
  • Chain 'D':
    Compound: bacteriocin immunity protein
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4uhpd_
  • Chain 'E':
    Compound: large component of pyocin ap41
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4uhpe_
  • Chain 'F':
    Compound: bacteriocin immunity protein
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q51503 (Start-89)
      • expression tag (90-95)
    Domains in SCOPe 2.06: d4uhpf1, d4uhpf2
  • Chain 'G':
    Compound: large component of pyocin ap41
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4uhpg_
  • Chain 'H':
    Compound: bacteriocin immunity protein
    Species: Pseudomonas aeruginosa PAO1 [TaxId:208964]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q51503 (0-89)
      • expression tag (90-91)
    Domains in SCOPe 2.06: d4uhph1, d4uhph2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4uhpA (A:)
depgvatgngqpvtgnwlagasqgdgvpipsqiadqlrgkefkswrdfreqfwmavskdp
salenlspsnryfvsqglapyavpeehlgskekfeihhvvplesggalynidnlvivtpk
rhseihkelklkrkek

    Sequence, based on observed residues (ATOM records): (download) 
    >4uhpA (A:)
depgvatgngqpvtgnwlagasqgdgvpipsqiadqlrgkefkswrdfreqfwmavskdp
salenlspsnryfvsqglapyavpeehlgskekfeihhvvplesggalynidnlvivtpk
rhseihkelklkrke

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4uhpB (B:)
mdiknnlsdytesefleiieeffknksglkgselekrmdklvkhfeevtshprksgvifh
pkpgfetpegivkevkewraanglpgfkaglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4uhpB (B:)
mdiknnlsdytesefleiieeffknksglkgselekrmdklvkhfeevtshprksgvifh
pkpgfetpegivkevkewraanglpgfkag

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4uhpC (C:)
depgvatgngqpvtgnwlagasqgdgvpipsqiadqlrgkefkswrdfreqfwmavskdp
salenlspsnryfvsqglapyavpeehlgskekfeihhvvplesggalynidnlvivtpk
rhseihkelklkrkek

    Sequence, based on observed residues (ATOM records): (download) 
    >4uhpC (C:)
epgvatgngqpvtgnwlagasqgdgvpipsqiadqlrgkefkswrdfreqfwmavskdps
alenlspsnryfvsqglapyavpeehlgskekfeihhvvplesggalynidnlvivtpkr
hseihkel

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4uhpD (D:)
mdiknnlsdytesefleiieeffknksglkgselekrmdklvkhfeevtshprksgvifh
pkpgfetpegivkevkewraanglpgfkaglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4uhpD (D:)
knnlsdytesefleiieeffknksglkgselekrmdklvkhfeevtshprksgvifhpkp
gfetpegivkevkewraanglpgfkag

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4uhpE (E:)
depgvatgngqpvtgnwlagasqgdgvpipsqiadqlrgkefkswrdfreqfwmavskdp
salenlspsnryfvsqglapyavpeehlgskekfeihhvvplesggalynidnlvivtpk
rhseihkelklkrkek

    Sequence, based on observed residues (ATOM records): (download) 
    >4uhpE (E:)
depgvatgngqpvtgnwlagasqgdgvpipsqiadqlrgkefkswrdfreqfwmavskdp
salenlspsnryfvsqglapyavpeehlgskekfeihhvvplesggalynidnlvivtpk
rhseihkelklk

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4uhpF (F:)
mdiknnlsdytesefleiieeffknksglkgselekrmdklvkhfeevtshprksgvifh
pkpgfetpegivkevkewraanglpgfkaglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4uhpF (F:)
iknnlsdytesefleiieeffknksglkgselekrmdklvkhfeevtshprksgvifhpk
pgfetpegivkevkewraanglpgfkaglehhhh

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4uhpG (G:)
depgvatgngqpvtgnwlagasqgdgvpipsqiadqlrgkefkswrdfreqfwmavskdp
salenlspsnryfvsqglapyavpeehlgskekfeihhvvplesggalynidnlvivtpk
rhseihkelklkrkek

    Sequence, based on observed residues (ATOM records): (download) 
    >4uhpG (G:)
epgvatgngqpvtgnwlagasqgdgvpipsqiadqlrgkefkswrdfreqfwmavskdps
alenlspsnryfvsqglapyavpeehlgskekfeihhvvplesggalynidnlvivtpkr
hseihkelkl

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4uhpH (H:)
mdiknnlsdytesefleiieeffknksglkgselekrmdklvkhfeevtshprksgvifh
pkpgfetpegivkevkewraanglpgfkaglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4uhpH (H:)
mdiknnlsdytesefleiieeffknksglkgselekrmdklvkhfeevtshprksgvifh
pkpgfetpegivkevkewraanglpgfkagle