PDB entry 4rox

View 4rox on RCSB PDB site
Description: Crystal Structure of P Domain of Hawaii Norovirus (GII.1)
Class: viral protein
Keywords: Virus Binding, HBGA, Virus surface, Protruding domain, Surface domain, VIRAL PROTEIN
Deposited on 2014-10-29, released 2016-05-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-06-29, with a file datestamp of 2016-06-24.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Capsid protein VP1
    Species: Norovirus Hu/GII.1/7EK/Hawaii/1971/USA [TaxId:1208060]
    Gene: VP1, U07611
    Database cross-references and differences (RAF-indexed):
    • Uniprot J9XXB7 (4-304)
      • expression tag (0-3)
    Domains in SCOPe 2.08: d4roxa1, d4roxa2
  • Chain 'B':
    Compound: Capsid protein VP1
    Species: Norovirus Hu/GII.1/7EK/Hawaii/1971/USA [TaxId:1208060]
    Gene: VP1, U07611
    Database cross-references and differences (RAF-indexed):
    • Uniprot J9XXB7 (4-304)
      • expression tag (0-3)
    Domains in SCOPe 2.08: d4roxb1, d4roxb2
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4roxA (A:)
gpgskpftlpiltigelsnsrfpvpidelytspnegvivqpqngrstldgellgttqlvp
snicalrgrinaqvpddhhqwnlqvtntngtpfdptedvpaplgtpdflaniygvtsqrn
pnntcrahdgvlatwspkftpklgsvilgtweesdldlnqptrftpvglfntdhfdqwal
psysgrltlnmnlapsvsplfpgeqllffrshiplkggtsdgaidcllpqewiqhfyqes
apsptdvalirytnpdtgrvlfeaklhrqgfitvansgsrpivvppngyfrfdswvnqfy
slapm

    Sequence, based on observed residues (ATOM records): (download) 
    >4roxA (A:)
gpgskpftlpiltigelsnsrfpvpidelytspnegvivqpqngrstldgellgttqlvp
snicalrgrinaqvdhhqwnlqvtntngtpfdptedvpaplgtpdflaniygvtsqrnpn
ntcrahdgvlatwspkftpklgsvilgtwldlnqptrftpvglfntdhfdqwalpsysgr
ltlnmnlapsvsplfpgeqllffrshiplkggtsdgaidcllpqewiqhfyqesapsptd
valirytnpdtgrvlfeaklhrqgfitvansgsrpivvppngyfrfdswvnqfyslapm

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4roxB (B:)
gpgskpftlpiltigelsnsrfpvpidelytspnegvivqpqngrstldgellgttqlvp
snicalrgrinaqvpddhhqwnlqvtntngtpfdptedvpaplgtpdflaniygvtsqrn
pnntcrahdgvlatwspkftpklgsvilgtweesdldlnqptrftpvglfntdhfdqwal
psysgrltlnmnlapsvsplfpgeqllffrshiplkggtsdgaidcllpqewiqhfyqes
apsptdvalirytnpdtgrvlfeaklhrqgfitvansgsrpivvppngyfrfdswvnqfy
slapm

    Sequence, based on observed residues (ATOM records): (download) 
    >4roxB (B:)
gpgskpftlpiltigelsnsrfpvpidelytspnegvivqpqngrstldgellgttqlvp
snicalrgrinaqvdhhqwnlqvtntngtpfdptedvpaplgtpdflaniygvtsqrnpn
ntcrahdgvlatwspkftpklgsvilgtwldlnqptrftpvglfntdhfdqwalpsysgr
ltlnmnlapsvsplfpgeqllffrshiplkggtsdgaidcllpqewiqhfyqesapsptd
valirytnpdtgrvlfeaklhrqgfitvansgsrpivvppngyfrfdswvnqfyslapm