PDB entry 4rje

View 4rje on RCSB PDB site
Description: Aerococcus viridans L-lactate oxidase mutant
Class: oxidoreductase
Keywords: beta/alpha barrel, TIM barrel, oxidase, FMN, OXIDOREDUCTASE
Deposited on 2014-10-08, released 2014-12-03
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-12-10, with a file datestamp of 2014-12-05.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.153
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lactate oxidase
    Species: Aerococcus viridans [TaxId:1377]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q44467 (Start-373)
      • engineered mutation (94)
      • engineered mutation (101)
      • engineered mutation (162)
      • engineered mutation (231)
      • engineered mutation (254)
    Domains in SCOPe 2.05: d4rjea_
  • Chain 'B':
    Compound: Lactate oxidase
    Species: Aerococcus viridans [TaxId:1377]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q44467 (Start-373)
      • engineered mutation (94)
      • engineered mutation (101)
      • engineered mutation (162)
      • engineered mutation (231)
      • engineered mutation (254)
    Domains in SCOPe 2.05: d4rjeb_
  • Chain 'C':
    Compound: Lactate oxidase
    Species: Aerococcus viridans [TaxId:1377]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q44467 (Start-373)
      • engineered mutation (94)
      • engineered mutation (101)
      • engineered mutation (162)
      • engineered mutation (231)
      • engineered mutation (254)
    Domains in SCOPe 2.05: d4rjec_
  • Chain 'D':
    Compound: Lactate oxidase
    Species: Aerococcus viridans [TaxId:1377]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q44467 (Start-373)
      • engineered mutation (94)
      • engineered mutation (101)
      • engineered mutation (162)
      • engineered mutation (231)
      • engineered mutation (254)
    Domains in SCOPe 2.05: d4rjed_
  • Heterogens: FNR, PYR, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4rjeA (A:)
mnnndieynapseikyidvvntydleeeaskvvphggfnyiagasgdewtkrandrawkh
kllyprlaqdveapdtsteilghkikapfimapigahglahatkeagtaravsefgtims
isaysgatfeeiseglnggprwfqiymakddqqnrdildeakgdgataiiltadstvsgn
rdrdvknkfvypfgmpivqrylrgtaegmslnniygaskqkisprdieeiaahsglpvfv
kgiqhpedadmaikagasgiwvsnhgarqlyeapgsfdtlpaiaervnkrvpivfdsgvr
rgehvakalasgadvvalgrpvlfglalggwqgaysvldyfqkdltrvmqltgsqnvedl
kgldlfdnpygyey

    Sequence, based on observed residues (ATOM records): (download) 
    >4rjeA (A:)
ieynapseikyidvvntydleeeaskvvphggfnyiagasgdewtkrandrawkhkllyp
rlaqdveapdtsteilghkikapfimapigahglahatkeagtaravsefgtimsisays
gatfeeiseglnggprwfqiymakddqqnrdildeakgdgataiiltadstvsgnrdrdv
knkfvypfgmpivqryltaegmslnniygaskqkisprdieeiaahsglpvfvkgiqhpe
dadmaikagasgiwvsnhgarqlyeapgsfdtlpaiaervnkrvpivfdsgvrrgehvak
alasgadvvalgrpvlfglalggwqgaysvldyfqkdltrvmqltgsqnvedlkgldlfd
npygyey

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4rjeB (B:)
mnnndieynapseikyidvvntydleeeaskvvphggfnyiagasgdewtkrandrawkh
kllyprlaqdveapdtsteilghkikapfimapigahglahatkeagtaravsefgtims
isaysgatfeeiseglnggprwfqiymakddqqnrdildeakgdgataiiltadstvsgn
rdrdvknkfvypfgmpivqrylrgtaegmslnniygaskqkisprdieeiaahsglpvfv
kgiqhpedadmaikagasgiwvsnhgarqlyeapgsfdtlpaiaervnkrvpivfdsgvr
rgehvakalasgadvvalgrpvlfglalggwqgaysvldyfqkdltrvmqltgsqnvedl
kgldlfdnpygyey

    Sequence, based on observed residues (ATOM records): (download) 
    >4rjeB (B:)
eynapseikyidvvntydleeeaskvvphggfnyiagasgdewtkrandrawkhkllypr
laqdveapdtsteilghkikapfimapigahglahatkeagtaravsefgtimsisaysg
atfeeiseglnggprwfqiymakddqqnrdildeakgdgataiiltadstvsgnrdrdvk
nkfvypfgmpivtaegmslnniygaskqkisprdieeiaahsglpvfvkgiqhpedadma
ikagasgiwvsnhgarqlyeapgsfdtlpaiaervnkrvpivfdsgvrrgehvakalasg
advvalgrpvlfglalggwqgaysvldyfqkdltrvmqltgsqnvedlkgldlfdnpygy
ey

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4rjeC (C:)
mnnndieynapseikyidvvntydleeeaskvvphggfnyiagasgdewtkrandrawkh
kllyprlaqdveapdtsteilghkikapfimapigahglahatkeagtaravsefgtims
isaysgatfeeiseglnggprwfqiymakddqqnrdildeakgdgataiiltadstvsgn
rdrdvknkfvypfgmpivqrylrgtaegmslnniygaskqkisprdieeiaahsglpvfv
kgiqhpedadmaikagasgiwvsnhgarqlyeapgsfdtlpaiaervnkrvpivfdsgvr
rgehvakalasgadvvalgrpvlfglalggwqgaysvldyfqkdltrvmqltgsqnvedl
kgldlfdnpygyey

    Sequence, based on observed residues (ATOM records): (download) 
    >4rjeC (C:)
ynapseikyidvvntydleeeaskvvphggfnyiagasgdewtkrandrawkhkllyprl
aqdveapdtsteilghkikapfimapigahglahatkeagtaravsefgtimsisaysga
tfeeiseglnggprwfqiymakddqqnrdildeakgdgataiiltadstvsgnrdrdvkn
kfvypfgmpivqryltaegmslnnskqkisprdieeiaahsglpvfvkgiqhpedadmai
kagasgiwvsnhgarqlyeapgsfdtlpaiaervnkrvpivfdsgvrrgehvakalasga
dvvalgrpvlfglalggwqgaysvldyfqkdltrvmqltgsqnvedlkgldlfdnpygye
y

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4rjeD (D:)
mnnndieynapseikyidvvntydleeeaskvvphggfnyiagasgdewtkrandrawkh
kllyprlaqdveapdtsteilghkikapfimapigahglahatkeagtaravsefgtims
isaysgatfeeiseglnggprwfqiymakddqqnrdildeakgdgataiiltadstvsgn
rdrdvknkfvypfgmpivqrylrgtaegmslnniygaskqkisprdieeiaahsglpvfv
kgiqhpedadmaikagasgiwvsnhgarqlyeapgsfdtlpaiaervnkrvpivfdsgvr
rgehvakalasgadvvalgrpvlfglalggwqgaysvldyfqkdltrvmqltgsqnvedl
kgldlfdnpygyey

    Sequence, based on observed residues (ATOM records): (download) 
    >4rjeD (D:)
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aqdveapdtsteilghkikapfimapigahglahatkeagtaravsefgtimsisaysga
tfeeiseglnggprwfqiymakddqqnrdildeakgdgataiiltadstvsgnrdrdvkn
kfvypfgmpivqryltaegmslnniygaskqkisprdieeiaahsglpvfvkgiqhpeda
dmaikagasgiwvsnhgarqlyeapgsfdtlpaiaervnkrvpivfdsgvrrgehvakal
asgadvvalgrpvlfglalggwqgaysvldyfqkdltrvmqltgsqnvedlkgldlfdnp
ygyey