PDB entry 4rhe

View 4rhe on RCSB PDB site
Description: Crystal structure of UbiX, an aromatic acid decarboxylase from the Colwellia psychrerythraea 34H
Class: lyase
Keywords: Rossmann fold, decarboxylase, LYASE
Deposited on 2014-10-02, released 2015-02-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-02-18, with a file datestamp of 2015-02-13.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.204
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
    Species: Colwellia psychrerythraea 34H [TaxId:167879]
    Gene: ubiX, CPS_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rhea_
  • Chain 'B':
    Compound: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
    Species: Colwellia psychrerythraea 34H [TaxId:167879]
    Gene: ubiX, CPS_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rheb_
  • Chain 'C':
    Compound: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
    Species: Colwellia psychrerythraea 34H [TaxId:167879]
    Gene: ubiX, CPS_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rhec_
  • Chain 'D':
    Compound: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
    Species: Colwellia psychrerythraea 34H [TaxId:167879]
    Gene: ubiX, CPS_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rhed_
  • Chain 'E':
    Compound: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
    Species: Colwellia psychrerythraea 34H [TaxId:167879]
    Gene: ubiX, CPS_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rhee_
  • Chain 'F':
    Compound: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
    Species: Colwellia psychrerythraea 34H [TaxId:167879]
    Gene: ubiX, CPS_0408
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rhef_
  • Heterogens: FMN, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4rheA (A:)
gshmnndfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkip
sspdaaskfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgm
sdnlieraadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkveti
edlidfmvgrvldhlgieqdimprwgyni

    Sequence, based on observed residues (ATOM records): (download) 
    >4rheA (A:)
dfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkipsspdaa
skfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgmsdnlie
raadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkvetiedlidf
mvgrvldhlgieqdimprwgyn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4rheB (B:)
gshmnndfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkip
sspdaaskfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgm
sdnlieraadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkveti
edlidfmvgrvldhlgieqdimprwgyni

    Sequence, based on observed residues (ATOM records): (download) 
    >4rheB (B:)
ndfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkipsspda
askfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgmsdnli
eraadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkvetiedlid
fmvgrvldhlgieqdimprwgyn

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4rheC (C:)
gshmnndfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkip
sspdaaskfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgm
sdnlieraadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkveti
edlidfmvgrvldhlgieqdimprwgyni

    Sequence, based on observed residues (ATOM records): (download) 
    >4rheC (C:)
dfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkipsspdaa
skfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgmsdnlie
raadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkvetiedlidf
mvgrvldhlgieqdimprwgy

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4rheD (D:)
gshmnndfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkip
sspdaaskfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgm
sdnlieraadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkveti
edlidfmvgrvldhlgieqdimprwgyni

    Sequence, based on observed residues (ATOM records): (download) 
    >4rheD (D:)
dfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkipsspdaa
skfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgmsdnlie
raadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkvetiedlidf
mvgrvldhlgieqdimprwgyn

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4rheE (E:)
gshmnndfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkip
sspdaaskfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgm
sdnlieraadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkveti
edlidfmvgrvldhlgieqdimprwgyni

    Sequence, based on observed residues (ATOM records): (download) 
    >4rheE (E:)
dfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkipsspdaa
skfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgmsdnlie
raadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkvetiedlidf
mvgrvldhlgieqdimprwgyn

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4rheF (F:)
gshmnndfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkip
sspdaaskfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgm
sdnlieraadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkveti
edlidfmvgrvldhlgieqdimprwgyni

    Sequence, based on observed residues (ATOM records): (download) 
    >4rheF (F:)
dfngkitlaitgasgasyamrliecliaanyqlyilcssagrivldtevgvkipsspdaa
skfltekyqakdqqitvfgkeqwfspvasgssapkqmvvcpcstgtmaaichgmsdnlie
raadvvikergqlilmvretpfstlhlqnmlslsqqgvtimpaspgfyhkvetiedlidf
mvgrvldhlgieqdimprwgyn