PDB entry 4rda

View 4rda on RCSB PDB site
Description: x-ray structure of the amyloid precursor protein-like protein 1 (aplp1) e2 domain in complex with a heparin dodecasaccharide
Class: sugar binding protein
Keywords: heparan sulfate binding, SUGAR BINDING PROTEIN
Deposited on 2014-09-18, released 2015-03-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Amyloid-like protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APLP1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rdaa_
  • Chain 'B':
    Compound: Amyloid-like protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: APLP1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4rdab_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4rdaA (A:)
eaefptdgvdiyfgmpgeisehegflrakmdleerrmrqinevmrewamadnqsknlpka
drqalnehfqsilqtleeqvsgerqrlvethatrvialindqrraalegflaalqadppq
aervllalrrylraeqkeqrhtlrhyqhvaavdpekaqqmrfqvhthlqvieervnqslg
lldqnphlaqelrpqiqellhsehlgpsel

    Sequence, based on observed residues (ATOM records): (download) 
    >4rdaA (A:)
dgvdiyfgmpgeisehegflrakmdleerrmrqinevmrewamadnqsknlpkadrqaln
ehfqsilqtleeqvsgerqrlvethatrvialindqrraalegflaalqadppqaervll
alrrylraeqkeqrhtlrhyqhvaavdpekaqqmrfqvhthlqvieervnqslglldqnp
hlaqelrpqiqellhsehlgpse

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4rdaB (B:)
eaefptdgvdiyfgmpgeisehegflrakmdleerrmrqinevmrewamadnqsknlpka
drqalnehfqsilqtleeqvsgerqrlvethatrvialindqrraalegflaalqadppq
aervllalrrylraeqkeqrhtlrhyqhvaavdpekaqqmrfqvhthlqvieervnqslg
lldqnphlaqelrpqiqellhsehlgpsel

    Sequence, based on observed residues (ATOM records): (download) 
    >4rdaB (B:)
dgvdiyfgmpgeisehegflrakmdleerrmrqinevmrewamadnqsknlpkadrqaln
ehfqsilqtleeqvsgerqrlvethatrvialindqrraalegflaalqadppqaervll
alrrylraeqkeqrhtlrhyqhvaavdpekaqqmrfqvhthlqvieervnqslglldqnp
hlaqelrpqiqellhs