PDB entry 4r62

View 4r62 on RCSB PDB site
Description: Structure of Rad6~Ub
Class: nuclear protein
Keywords: E2 conjugating enzyme, UBC, Monoubiquitination of Histone H2B at K123 in Saccharomyces cerevisiae, Bre1, Ubiquitin, PCNA, Rad18, Histone H2B, UBIQUITINATION, NUCLEUS, NUCLEAR PROTEIN
Deposited on 2014-08-22, released 2015-09-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-10-28, with a file datestamp of 2015-10-23.
Experiment type: XRAY
Resolution: 2.28 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin-conjugating enzyme E2 2
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: RAD6, UBC2, YGL058W
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06104
      • engineered mutation (87)
    Domains in SCOPe 2.07: d4r62a_
  • Chain 'B':
    Compound: Ubiquitin-40S ribosomal protein S27a
    Species: Homo sapiens [TaxId:9606]
    Gene: RPS27A, UBA80, UBCEP1, Ubiquitin
    Database cross-references and differences (RAF-indexed):
    • Uniprot P62979 (2-77)
      • expression tag (0-1)
    Domains in SCOPe 2.07: d4r62b1, d4r62b2
  • Heterogens: ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4r62A (A:)
    mstparrrlmrdfkrmkedappgvsasplpdnvmvwnamiigpadtpyedgtfrlllefd
    eeypnkpphvkflsemfhpnvyangeikldilqnrwtptydvasiltsiqslfndpnpas
    panveaatlfkdhksqyvkrvketveksweddmddmdddddddddddddead
    

    Sequence, based on observed residues (ATOM records): (download)
    >4r62A (A:)
    stparrrlmrdfkrmkedappgvsasplpdnvmvwnamiigpadtpyedgtfrlllefde
    eypnkpphvkflsemfhpnvyangeikldilqnrwtptydvasiltsiqslfndpnpasp
    anveaatlfkdhksqyvkrvketvekswe
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4r62B (B:)
    iqmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsd
    yniqkestlhlvlrlrgg