PDB entry 4r5j

View 4r5j on RCSB PDB site
Description: Crystal structure of the DnaK C-terminus (Dnak-SBD-A)
Class: Chaperone
Keywords: Helical bundle, beta sheets, Chaperone, membrane
Deposited on 2014-08-21, released 2014-09-10
The last revision prior to the SCOPe 2.07 freeze date was dated 2014-12-03, with a file datestamp of 2014-11-28.
Experiment type: XRAY
Resolution: 2.36 Å
R-factor: 0.218
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Chaperone protein dnaK
    Species: Escherichia coli [TaxId:83333]
    Gene: dnaK, groP, grpF, seg, b0014, JW0013
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6Y8 (9-End)
      • expression tag (4-8)
    Domains in SCOPe 2.07: d4r5ja1, d4r5ja2, d4r5ja3
  • Chain 'B':
    Compound: Chaperone protein dnaK
    Species: Escherichia coli [TaxId:83333]
    Gene: dnaK, groP, grpF, seg, b0014, JW0013
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6Y8 (9-End)
      • expression tag (4-8)
    Domains in SCOPe 2.07: d4r5jb1, d4r5jb2, d4r5jb3
  • Chain 'C':
    Compound: Chaperone protein dnaK
    Species: Escherichia coli [TaxId:83333]
    Gene: dnaK, groP, grpF, seg, b0014, JW0013
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6Y8 (9-227)
      • expression tag (4-8)
    Domains in SCOPe 2.07: d4r5jc1, d4r5jc2, d4r5jc3
  • Chain 'D':
    Compound: Chaperone protein dnaK
    Species: Escherichia coli [TaxId:83333]
    Gene: dnaK, groP, grpF, seg, b0014, JW0013
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6Y8 (9-End)
      • expression tag (4-8)
    Domains in SCOPe 2.07: d4r5jd1, d4r5jd2, d4r5jd3
  • Heterogens: CA, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4r5jA (A:)
    mhhhhhhievllldvtplslgietmggvmttliaknttiptkhsqvfstaednqsavtih
    vlqgerkraadnkslgqfnldginpaprgmpqievtfdidadgilhvsakdknsgkeqki
    tikassglnedeiqkmvrdaeanaeadrkfeelvqtrnqgdhllhstrkqveeagdklpa
    ddktaiesaltaletalkgedkaaieakmqelaqvsqklmeiaqqqha
    

    Sequence, based on observed residues (ATOM records): (download)
    >4r5jA (A:)
    hhhievllldvtplslgietmggvmttliaknttiptkhsqvfstaednqsavtihvlqg
    erkraadnkslgqfnldginpaprgmpqievtfdidadgilhvsakdknsgkeqkitika
    nedeiqkmvrdaeanaeadrkfeelvqtrnqgdhllhstrkqveeagdklpaddktaies
    altaletalkgedkaaieakmqelaqvsqklmeiaqqq
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4r5jB (B:)
    mhhhhhhievllldvtplslgietmggvmttliaknttiptkhsqvfstaednqsavtih
    vlqgerkraadnkslgqfnldginpaprgmpqievtfdidadgilhvsakdknsgkeqki
    tikassglnedeiqkmvrdaeanaeadrkfeelvqtrnqgdhllhstrkqveeagdklpa
    ddktaiesaltaletalkgedkaaieakmqelaqvsqklmeiaqqqha
    

    Sequence, based on observed residues (ATOM records): (download)
    >4r5jB (B:)
    hhhievllldvtplslgietmggvmttliaknttiptkhsqvfstaednqsavtihvlqg
    erkraadnkslgqfnldginpaprgmpqievtfdidadgilhvsakdknsgkeqkitikl
    nedeiqkmvrdaeanaeadrkfeelvqtrnqgdhllhstrkqveeagdklpaddktaies
    altaletalkgedkaaieakmqelaqvsqklmeiaqqq
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4r5jC (C:)
    mhhhhhhievllldvtplslgietmggvmttliaknttiptkhsqvfstaednqsavtih
    vlqgerkraadnkslgqfnldginpaprgmpqievtfdidadgilhvsakdknsgkeqki
    tikassglnedeiqkmvrdaeanaeadrkfeelvqtrnqgdhllhstrkqveeagdklpa
    ddktaiesaltaletalkgedkaaieakmqelaqvsqklmeiaqqqha
    

    Sequence, based on observed residues (ATOM records): (download)
    >4r5jC (C:)
    hhhievllldvtplslgietmggvmttliaknttiptkhsqvfstaednqsavtihvlqg
    erkraadnkslgqfnldginpaprgmpqievtfdidadgilhvsakdknsgkeqkitika
    ssglnedeiqkmvrdaeanaeadrkfeelvqtrnqgdhllhstrkqveeagdklpaddkt
    aiesaltaletalkgedkaaieakmqelaqvsqklmeiaqqqha
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4r5jD (D:)
    mhhhhhhievllldvtplslgietmggvmttliaknttiptkhsqvfstaednqsavtih
    vlqgerkraadnkslgqfnldginpaprgmpqievtfdidadgilhvsakdknsgkeqki
    tikassglnedeiqkmvrdaeanaeadrkfeelvqtrnqgdhllhstrkqveeagdklpa
    ddktaiesaltaletalkgedkaaieakmqelaqvsqklmeiaqqqha
    

    Sequence, based on observed residues (ATOM records): (download)
    >4r5jD (D:)
    hhhievllldvtplslgietmggvmttliaknttiptkhsqvfstaednqsavtihvlqg
    erkraadnkslgqfnldginpaprgmpqievtfdidadgilhvsakdknsgkeqkitika
    ssglnedeiqkmvrdaeanaeadrkfeelvqtrnqgdhllhstrkqveeagdklpaddkt
    aiesaltaletalkgedkaaieakmqelaqvsqklmeiaqq