PDB entry 4r31

View 4r31 on RCSB PDB site
Description: Crystal structure of a putative uridine phosphorylase from Actinobacillus succinogenes 130Z (Target NYSGRC-029667 )
Class: transferase
Keywords: phosphorylase, uridine, Structural genomics, NYSGRC, PSI-Biology, New York Structural Genomics Research Consortium, TRANSFERASE
Deposited on 2014-08-13, released 2014-08-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uridine phosphorylase
    Species: Actinobacillus succinogenes [TaxId:339671]
    Gene: Asuc_0427
    Database cross-references and differences (RAF-indexed):
    • Uniprot A6VLF7 (22-End)
      • expression tag (18-21)
    Domains in SCOPe 2.08: d4r31a1, d4r31a2
  • Chain 'B':
    Compound: Uridine phosphorylase
    Species: Actinobacillus succinogenes [TaxId:339671]
    Gene: Asuc_0427
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4r31b_
  • Chain 'C':
    Compound: Uridine phosphorylase
    Species: Actinobacillus succinogenes [TaxId:339671]
    Gene: Asuc_0427
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4r31c_
  • Chain 'D':
    Compound: Uridine phosphorylase
    Species: Actinobacillus succinogenes [TaxId:339671]
    Gene: Asuc_0427
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4r31d_
  • Chain 'E':
    Compound: Uridine phosphorylase
    Species: Actinobacillus succinogenes [TaxId:339671]
    Gene: Asuc_0427
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4r31e_
  • Chain 'F':
    Compound: Uridine phosphorylase
    Species: Actinobacillus succinogenes [TaxId:339671]
    Gene: Asuc_0427
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4r31f_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4r31A (A:)
mhhhhhhssgvdlgtenlyfqsmsevfhlgltkamlkgakiavipgdparseriaqrmdk
peflassreftswlgylenepvvvcstgiggpsvsicveelaqlgvgtflrigttgaiqp
yinvgdvlvttgavrldgasrhfapleypavadfsctnalysaavaqgitpyvgitassd
tfypgqerydtfsgkvypayqgslkqwqdlnvmnyemesatlftmcaalglkagmvagvi
vnrtqqeipneatiksteqkavavvieaarrlisagrig

    Sequence, based on observed residues (ATOM records): (download) 
    >4r31A (A:)
yfqsmsevfhlgltkamlkgakiavipgdparseriaqrmdkpeflassreftswlgyle
nepvvvcstgiggpsvsicveelaqlgvgtflrigttgaiqpyinvgdvlvttgavrldg
asrhfapleypavadfsctnalysaavaqgitpyvgitassdtfypgqerydtfsgkvyp
ayqgslkqwqdlnvmnyemesatlftmcaalglkagmvagvivnrtqqeipneatikste
qkavavvieaarrlisagr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4r31B (B:)
mhhhhhhssgvdlgtenlyfqsmsevfhlgltkamlkgakiavipgdparseriaqrmdk
peflassreftswlgylenepvvvcstgiggpsvsicveelaqlgvgtflrigttgaiqp
yinvgdvlvttgavrldgasrhfapleypavadfsctnalysaavaqgitpyvgitassd
tfypgqerydtfsgkvypayqgslkqwqdlnvmnyemesatlftmcaalglkagmvagvi
vnrtqqeipneatiksteqkavavvieaarrlisagrig

    Sequence, based on observed residues (ATOM records): (download) 
    >4r31B (B:)
msevfhlgltkamlkgakiavipgdparseriaqrmdkpeflassreftswlgylenepv
vvcstgiggpsvsicveelaqlgvgtflrigttgaiqpyinvgdvlvttgavrldgasrh
fapleypavadfsctnalysaavaqgitpyvgitassdtfypgqerydtfsgkvypayqg
slkqwqdlnvmnyemesatlftmcaalglkagmvagvivnrtqqeipneatiksteqkav
avvieaarrlisag

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4r31C (C:)
mhhhhhhssgvdlgtenlyfqsmsevfhlgltkamlkgakiavipgdparseriaqrmdk
peflassreftswlgylenepvvvcstgiggpsvsicveelaqlgvgtflrigttgaiqp
yinvgdvlvttgavrldgasrhfapleypavadfsctnalysaavaqgitpyvgitassd
tfypgqerydtfsgkvypayqgslkqwqdlnvmnyemesatlftmcaalglkagmvagvi
vnrtqqeipneatiksteqkavavvieaarrlisagrig

    Sequence, based on observed residues (ATOM records): (download) 
    >4r31C (C:)
sevfhlgltkamlkgakiavipgdparseriaqrmdkpeflassreftswlgylenepvv
vcstgiggpsvsicveelaqlgvgtflrigttgaiqpyinvgdvlvttgavrldgasrhf
apleypavadfsctnalysaavaqgitpyvgitassdtfypgqerydtfsgkvypayqgs
lkqwqdlnvmnyemesatlftmcaalglkagmvagvivnrtqqeipneatiksteqkava
vvieaarrlisag

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4r31D (D:)
mhhhhhhssgvdlgtenlyfqsmsevfhlgltkamlkgakiavipgdparseriaqrmdk
peflassreftswlgylenepvvvcstgiggpsvsicveelaqlgvgtflrigttgaiqp
yinvgdvlvttgavrldgasrhfapleypavadfsctnalysaavaqgitpyvgitassd
tfypgqerydtfsgkvypayqgslkqwqdlnvmnyemesatlftmcaalglkagmvagvi
vnrtqqeipneatiksteqkavavvieaarrlisagrig

    Sequence, based on observed residues (ATOM records): (download) 
    >4r31D (D:)
evfhlgltkamlkgakiavipgdparseriaqrmdkpeflassreftswlgylenepvvv
cstgiggpsvsicveelaqlgvgtflrigttgaiqpyinvgdvlvttgavrldgasrhfa
pleypavadfsctnalysaavaqgitpyvgitassdtfypgqerydtfsgkvypayqgsl
kqwqdlnvmnyemesatlftmcaalglkagmvagvivnrtqqeipneatiksteqkavav
vieaarrlisag

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4r31E (E:)
mhhhhhhssgvdlgtenlyfqsmsevfhlgltkamlkgakiavipgdparseriaqrmdk
peflassreftswlgylenepvvvcstgiggpsvsicveelaqlgvgtflrigttgaiqp
yinvgdvlvttgavrldgasrhfapleypavadfsctnalysaavaqgitpyvgitassd
tfypgqerydtfsgkvypayqgslkqwqdlnvmnyemesatlftmcaalglkagmvagvi
vnrtqqeipneatiksteqkavavvieaarrlisagrig

    Sequence, based on observed residues (ATOM records): (download) 
    >4r31E (E:)
evfhlgltkamlkgakiavipgdparseriaqrmdkpeflassreftswlgylenepvvv
cstgiggpsvsicveelaqlgvgtflrigttgaiqpyinvgdvlvttgavrldgasrhfa
pleypavadfsctnalysaavaqgitpyvgitassdtfypgqerydtfsgkvypayqgsl
kqwqdlnvmnyemesatlftmcaalglkagmvagvivnrtqqeipneatiksteqkavav
vieaarrlisa

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4r31F (F:)
mhhhhhhssgvdlgtenlyfqsmsevfhlgltkamlkgakiavipgdparseriaqrmdk
peflassreftswlgylenepvvvcstgiggpsvsicveelaqlgvgtflrigttgaiqp
yinvgdvlvttgavrldgasrhfapleypavadfsctnalysaavaqgitpyvgitassd
tfypgqerydtfsgkvypayqgslkqwqdlnvmnyemesatlftmcaalglkagmvagvi
vnrtqqeipneatiksteqkavavvieaarrlisagrig

    Sequence, based on observed residues (ATOM records): (download) 
    >4r31F (F:)
sevfhlgltkamlkgakiavipgdparseriaqrmdkpeflassreftswlgylenepvv
vcstgiggpsvsicveelaqlgvgtflrigttgaiqpyinvgdvlvttgavrldgasrhf
apleypavadfsctnalysaavaqgitpyvgitassdtfypgqerydtfsgkvypayqgs
lkqwqdlnvmnyemesatlftmcaalglkagmvagvivnrtqqeipneatiksteqkava
vvieaarrlisag