PDB entry 4r1q

View 4r1q on RCSB PDB site
Description: Crystal Structure of Thermophilic Geobacillus kaustophilus L-Arabinose isomerase in complex with L-arabitol
Class: Isomerase
Keywords: Hexamer, Thermophile, thermostable, AI fold, Isomerase
Deposited on 2014-08-07, released 2015-08-12
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-10-21, with a file datestamp of 2015-10-16.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4r1qa1, d4r1qa2
  • Chain 'B':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4r1qb1, d4r1qb2
  • Chain 'C':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4r1qc1, d4r1qc2
  • Chain 'D':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q5KYP7 (1-End)
      • see remark 999 (0)
    Domains in SCOPe 2.06: d4r1qd1, d4r1qd2
  • Chain 'E':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4r1qe1, d4r1qe2
  • Chain 'F':
    Compound: L-arabinose isomerase
    Species: GEOBACILLUS KAUSTOPHILUS HTA426 [TaxId:235909]
    Gene: araA, GK1904
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4r1qf1, d4r1qf2
  • Heterogens: SST, MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4r1qA (A:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1qA (A:)
mlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeei
rrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdf
mnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvar
fgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydiv
pagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaeg
ygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatr
prvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklp
varilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvs
sfknelkwnevfwrg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4r1qB (B:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1qB (B:)
lslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeeir
rvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdfm
nlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvarf
gdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydivp
agrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaegy
gfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatrp
rvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklpv
arilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvss
fknelkwnevfwrgr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4r1qC (C:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1qC (C:)
lslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeeir
rvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdfm
nlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvarf
gdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydivp
agrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaegy
gfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatrp
rvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklpv
arilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvss
fknelkwnevfwrgr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4r1qD (D:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1qD (D:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4r1qE (E:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1qE (E:)
mlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeei
rrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdf
mnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvar
fgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydiv
pagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaeg
ygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatr
prvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklp
varilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvs
sfknelkwnevfwrgr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4r1qF (F:)
mmlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpee
irrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmd
fmnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkva
rfgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydi
vpagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmae
gygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaat
rprvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpkl
pvarilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsv
ssfknelkwnevfwrgr

    Sequence, based on observed residues (ATOM records): (download) 
    >4r1qF (F:)
mlslrpyefwfvtgsqhlygeealkqveehsrimvnewnrdsvfpfpfvfksvvttpeei
rrvcleanaseqcagvvtwmhtfspakmwiggllelrkpllhlhtqfnrdipwdsidmdf
mnlnqsahgdreygfigarmgvarkvvvghwedpevrerlakwmrtavafaesrnlkvar
fgdnmrevavtegdkvgaqiqfgwsvngygigdlvqyirdvseqkvnelldeyeelydiv
pagrqegpvresireqarielglkaflqdgnftaftttfedlhgmkqlpglavqrlmaeg
ygfggegdwktaalvrlmkvmadgkgtsfmedytyhfepgnelilgahmlevcptiaatr
prvevhplsiggkedparlvfdggegaavnaslidlghrfrlivnevdavkpehdmpklp
varilwkprpslrdsaeawilaggahhtcfsfavtteqlqdfaemagiecvvinehtsvs
sfknelkwnevfwrg