PDB entry 4qko

View 4qko on RCSB PDB site
Description: The Crystal Structure of the Pyocin S2 Nuclease Domain, Immunity Protein Complex at 1.8 Angstroms
Class: antimicrobial protein
Keywords: HNH Nuclease Domain, Colicin Nuclease Immunity Protein Complex, Bacteriocin, Bacterial Cytotoxin, ANTIMICROBIAL PROTEIN
Deposited on 2014-06-07, released 2015-06-10
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-06-10, with a file datestamp of 2015-06-05.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pyocin-S2 immunity protein
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: imm2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4qkoa_
  • Chain 'B':
    Compound: Pyocin-S2
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: pys2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4qkob_
  • Chain 'C':
    Compound: Pyocin-S2 immunity protein
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: imm2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4qkoc_
  • Chain 'D':
    Compound: Pyocin-S2
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: pys2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4qkod_
  • Chain 'E':
    Compound: Pyocin-S2 immunity protein
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: imm2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4qkoe_
  • Chain 'F':
    Compound: Pyocin-S2
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: pys2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4qkof_
  • Chain 'G':
    Compound: Pyocin-S2 immunity protein
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: imm2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4qkog_
  • Chain 'H':
    Compound: Pyocin-S2
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Gene: pys2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4qkoh_
  • Heterogens: BR, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4qkoA (A:)
mkskiseytekeflefvkdiytnnkkkfpteeshiqavlefkkltehpsgsdllyypnen
redspagvvkevkewraskglpgfkaglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4qkoA (A:)
mkskiseytekeflefvkdiytnnkkkfpteeshiqavlefkkltehpsgsdllyypnen
redspagvvkevkewraskglpgfkag

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4qkoB (B:)
rdprdvpgaatgkgqpvsgnwlgaasqgegapipsqiadklrgktfknwrdfreqfwiav
andpelskqfnpgslavmrdggapyvreseqaggrikieihhkvriadgggvynmgnlva
vtpkrhieihkggk

    Sequence, based on observed residues (ATOM records): (download) 
    >4qkoB (B:)
rdprdvpgaatgkgqpvsgnwlgaasqgegapipsqiadklrgktfknwrdfreqfwiav
andpelskqfnpgslavmrdggapyvreseqaggrikieihhkvriadgggvynmgnlva
vtpkrhieihk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4qkoC (C:)
mkskiseytekeflefvkdiytnnkkkfpteeshiqavlefkkltehpsgsdllyypnen
redspagvvkevkewraskglpgfkaglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4qkoC (C:)
mkskiseytekeflefvkdiytnnkkkfpteeshiqavlefkkltehpsgsdllyypnen
redspagvvkevkewraskglpgfkag

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4qkoD (D:)
rdprdvpgaatgkgqpvsgnwlgaasqgegapipsqiadklrgktfknwrdfreqfwiav
andpelskqfnpgslavmrdggapyvreseqaggrikieihhkvriadgggvynmgnlva
vtpkrhieihkggk

    Sequence, based on observed residues (ATOM records): (download) 
    >4qkoD (D:)
rdprdvpgaatgkgqpvsgnwlgaasqgegapipsqiadklrgktfknwrdfreqfwiav
andpelskqfnpgslavmrdggapyvreseqaggrikieihhkvriadgggvynmgnlva
vtpkrhieihkgg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4qkoE (E:)
mkskiseytekeflefvkdiytnnkkkfpteeshiqavlefkkltehpsgsdllyypnen
redspagvvkevkewraskglpgfkaglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4qkoE (E:)
mkskiseytekeflefvkdiytnnkkkfpteeshiqavlefkkltehpsgsdllyypnen
redspagvvkevkewraskglpgfkag

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4qkoF (F:)
rdprdvpgaatgkgqpvsgnwlgaasqgegapipsqiadklrgktfknwrdfreqfwiav
andpelskqfnpgslavmrdggapyvreseqaggrikieihhkvriadgggvynmgnlva
vtpkrhieihkggk

    Sequence, based on observed residues (ATOM records): (download) 
    >4qkoF (F:)
rdprdvpgaatgkgqpvsgnwlgaasqgegapipsqiadklrgktfknwrdfreqfwiav
andpelskqfnpgslavmrdggapyvreseqaggrikieihhkvriadgggvynmgnlva
vtpkrhieihk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4qkoG (G:)
mkskiseytekeflefvkdiytnnkkkfpteeshiqavlefkkltehpsgsdllyypnen
redspagvvkevkewraskglpgfkaglehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4qkoG (G:)
kskiseytekeflefvkdiytnnkkkfpteeshiqavlefkkltehpsgsdllyypnenr
edspagvvkevkewraskglpgfkag

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4qkoH (H:)
rdprdvpgaatgkgqpvsgnwlgaasqgegapipsqiadklrgktfknwrdfreqfwiav
andpelskqfnpgslavmrdggapyvreseqaggrikieihhkvriadgggvynmgnlva
vtpkrhieihkggk

    Sequence, based on observed residues (ATOM records): (download) 
    >4qkoH (H:)
rdprdvpgaatgkgqpvsgnwlgaasqgegapipsqiadklrgktfknwrdfreqfwiav
andpelskqfnpgslavmrdggapyvreseqaggrikieihhkvriadgggvynmgnlva
vtpkrhieihk