PDB entry 4qki
View 4qki on RCSB PDB site
Description: Dimeric form of human LLT1, a ligand for NKR-P1
Class: immune system
Keywords: C-type lectin like fold, ligand for human receptor NKR-P1, glycosylation; deglycosylated after the first GlcNac unit, anchored in membrane on cell surface, IMMUNE SYSTEM
Deposited on
2014-06-06, released
2015-03-11
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-03-11, with a file datestamp of
2015-03-06.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: C-type lectin domain family 2 member D
Species: Homo sapiens [TaxId:9606]
Gene: CLAX, CLEC2B, CLEC2D, LLT1, OCIL
Database cross-references and differences (RAF-indexed):
- Uniprot Q9UHP7 (Start-122)
- engineered mutation (107)
- expression tag (123-125)
Domains in SCOPe 2.06: d4qkia1, d4qkia2 - Chain 'B':
Compound: C-type lectin domain family 2 member D
Species: Homo sapiens [TaxId:9606]
Gene: CLAX, CLEC2B, CLEC2D, LLT1, OCIL
Database cross-references and differences (RAF-indexed):
- Uniprot Q9UHP7 (Start-122)
- engineered mutation (107)
- expression tag (123)
Domains in SCOPe 2.06: d4qkib1, d4qkib2 - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4qkiA (A:)
itgqaacpeswigfqrkcfyfsddtknwtssqrfcdsqdadlaqvesfqelnfllrykgp
sdhwiglsreqgqpwkwingtewtrqfpilgagecaylndkgassarcyterkwicsksd
ihvgtkhhhhhhhhg
Sequence, based on observed residues (ATOM records): (download)
>4qkiA (A:)
aacpeswigfqrkcfyfsddtknwtssqrfcdsqdadlaqvesfqelnfllrykgpsdhw
iglsreqgqpwkwingtewtrqfpilgagecaylndkgassarcyterkwicsksdihvg
tk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4qkiB (B:)
itgqaacpeswigfqrkcfyfsddtknwtssqrfcdsqdadlaqvesfqelnfllrykgp
sdhwiglsreqgqpwkwingtewtrqfpilgagecaylndkgassarcyterkwicsksd
ihvgtkhhhhhhhhg
Sequence, based on observed residues (ATOM records): (download)
>4qkiB (B:)
aacpeswigfqrkcfyfsddtknwtssqrfcdsqdadlaqvesfqelnfllrykgpsdhw
iglsreqgqpwkwingtewtrqfpilgagecaylndkgassarcyterkwicsksdihvg