PDB entry 4qc9

View 4qc9 on RCSB PDB site
Description: crystal structure of vaccinia virus uracil-dna glycosylase mutant 3gd4
Deposited on 2014-05-09, released 2015-05-13
The last revision was dated 2019-07-17, with a file datestamp of 2019-07-12.
Experiment type: XRAY
Resolution: 2.26 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: uracil-DNA glycosylase
    Species: Vaccinia virus [TaxId:126794]
    Gene: ACAM3000_MVA_101, D4, MVA101R, UNG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q91UM2 (3-220)
      • expression tag (2)
      • engineered mutation (19)
      • engineered mutation (173-175)
  • Chain 'B':
    Compound: uracil-DNA glycosylase
    Species: Vaccinia virus [TaxId:126794]
    Gene: ACAM3000_MVA_101, D4, MVA101R, UNG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q91UM2 (3-220)
      • engineered mutation (19)
      • engineered mutation (173-175)
  • Chain 'C':
    Compound: uracil-DNA glycosylase
    Species: Vaccinia virus [TaxId:126794]
    Gene: ACAM3000_MVA_101, D4, MVA101R, UNG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q91UM2 (3-220)
      • expression tag (2)
      • engineered mutation (19)
      • engineered mutation (174-175)
  • Chain 'D':
    Compound: uracil-DNA glycosylase
    Species: Vaccinia virus [TaxId:126794]
    Gene: ACAM3000_MVA_101, D4, MVA101R, UNG
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q91UM2 (3-220)
      • expression tag (1-2)
      • engineered mutation (19)
      • engineered mutation (173-175)
  • Heterogens: SO4, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4qc9A (A:)
gshmnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqpl
rnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvi
pwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgktdfsniraklgggvtti
vgyhpaardrqfekdrsfeiinvlleldnkapinwaqgfiy

    Sequence, based on observed residues (ATOM records):
    >4qc9A (A:)
hmnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqplrn
krvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipw
nyylscklgetkshaiywdkisklllqhitkhvsvlyclgktdfsniraklgggvttivg
yhpaardrqfekdrsfeiinvlleldnkapinwaqgfiy

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4qc9B (B:)
gshmnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqpl
rnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvi
pwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgktdfsniraklgggvtti
vgyhpaardrqfekdrsfeiinvlleldnkapinwaqgfiy

    Sequence, based on observed residues (ATOM records):
    >4qc9B (B:)
mnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqplrnk
rvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipwn
yylscklgetkshaiywdkisklllqhitkhvsvlyclgktdfsniraklgggvttivgy
hpaardrqfekdrsfeiinvlleldnkapinwaqgfiy

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4qc9C (C:)
gshmnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqpl
rnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvi
pwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgktdfsniraklgggvtti
vgyhpaardrqfekdrsfeiinvlleldnkapinwaqgfiy

    Sequence, based on observed residues (ATOM records):
    >4qc9C (C:)
hmnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqplrn
krvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvipw
nyylscklgetkshaiywdkisklllqhitkhvsvlyclgktdfsniraklggvttivgy
hpaardrqfekdrsfeiinvlleldnkapinwaqgfiy

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4qc9D (D:)
gshmnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqpl
rnkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvi
pwnyylscklgetkshaiywdkisklllqhitkhvsvlyclgktdfsniraklgggvtti
vgyhpaardrqfekdrsfeiinvlleldnkapinwaqgfiy

    Sequence, based on observed residues (ATOM records):
    >4qc9D (D:)
shmnsvtvshapytityhndwepvmsqlvefynevaswllrdetspipdkffiqlkqplr
nkrvcvcgidpypkdgtgvpfespnftkksikeiassisrltgvidykgynlniidgvip
wnyylscklgetkshaiywdkisklllqhitkhvsvlyclgktdfsniraklgggvttiv
gyhpaardrqfekdrsfeiinvlleldnkapinwaqgfiy