PDB entry 4q6k

View 4q6k on RCSB PDB site
Description: crystal structure of a putative neuraminidase (baccac_01090) from bacteroides caccae atcc 43185 at 1.90 a resolution (psi community target)
Deposited on 2014-04-22, released 2014-10-01
The last revision was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: BNR/Asp-box repeat protein
    Species: Bacteroides caccae [TaxId:411901]
    Gene: BACCAC_01090
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: BNR/Asp-box repeat protein
    Species: Bacteroides caccae [TaxId:411901]
    Gene: BACCAC_01090
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: BNR/Asp-box repeat protein
    Species: Bacteroides caccae [TaxId:411901]
    Gene: BACCAC_01090
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: BNR/Asp-box repeat protein
    Species: Bacteroides caccae [TaxId:411901]
    Gene: BACCAC_01090
    Database cross-references and differences (RAF-indexed):
  • Heterogens: K, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4q6kA (A:)
gvtsdtvfvretqipilierqdnvlfmlrlnakesrsldevvlnfgkdvnmadiqsvkly
ysgtearqnygkkfftpvsyisshtpgktlaanpsysinksqvnnpgrkvilnanqklfp
ginyfwislqmkpgaslldkvsakivtvkvdnkealmhtvspeniahrvgvgvrhagddg
saafripglattnkgtllgvydvrynssvdlqehvdvglsrsvdggktwekmrlplafge
tgglpaaqngvgdpsilvdtktnttwvvaawthgmgnqrawwssypgmdmnhtaqlvlsk
stddgktwsepinitdqvkdpswyfllqgpgrgitmqdgtlvfpiqfidstrvpnagimy
skdrgetwkihnyartntteaqvaevepgvlmlnmrdnrggsravattkdlgktwtehps
srkalqepvcmaslisvkaadntlnkdillfsnpntvkgrhhitikasldggitwlpehq
vmldegdgwgyscltmidketvgilyessvahmtfqairlrdiiq

    Sequence, based on observed residues (ATOM records):
    >4q6kA (A:)
tsdtvfvretqipilierqdnvlfmlrlnakesrsldevvlnfgkdvnmadiqsvklyys
gtearqnygkkfftpvsyisshtpgktlaanpsysinksqvnnpgrkvilnanqklfpgi
nyfwislqmkpgaslldkvsakivtvkvdnkealmhtvspeniahrvgvgvrhagddgsa
afripglattnkgtllgvydvrynssvdlqehvdvglsrsvdggktwekmrlplafgetg
glpaaqngvgdpsilvdtktnttwvvaawthgmgnqrawwssypgmdmnhtaqlvlskst
ddgktwsepinitdqvkdpswyfllqgpgrgitmqdgtlvfpiqfidstrvpnagimysk
drgetwkihnyartntteaqvaevepgvlmlnmrdnrggsravattkdlgktwtehpssr
kalqepvcmaslisvkaadntlnkdillfsnpntvkgrhhitikasldggitwlpehqvm
ldegdgwgyscltmidketvgilyessvahmtfqairlrdiiq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4q6kB (B:)
gvtsdtvfvretqipilierqdnvlfmlrlnakesrsldevvlnfgkdvnmadiqsvkly
ysgtearqnygkkfftpvsyisshtpgktlaanpsysinksqvnnpgrkvilnanqklfp
ginyfwislqmkpgaslldkvsakivtvkvdnkealmhtvspeniahrvgvgvrhagddg
saafripglattnkgtllgvydvrynssvdlqehvdvglsrsvdggktwekmrlplafge
tgglpaaqngvgdpsilvdtktnttwvvaawthgmgnqrawwssypgmdmnhtaqlvlsk
stddgktwsepinitdqvkdpswyfllqgpgrgitmqdgtlvfpiqfidstrvpnagimy
skdrgetwkihnyartntteaqvaevepgvlmlnmrdnrggsravattkdlgktwtehps
srkalqepvcmaslisvkaadntlnkdillfsnpntvkgrhhitikasldggitwlpehq
vmldegdgwgyscltmidketvgilyessvahmtfqairlrdiiq

    Sequence, based on observed residues (ATOM records):
    >4q6kB (B:)
tsdtvfvretqipilierqdnvlfmlrlnakesrsldevvlnfgkdvnmadiqsvklyys
gtearqnygkkfftpvsyisshtpgktlaanpsysinksqvnnpgrkvilnanqklfpgi
nyfwislqmkpgaslldkvsakivtvkvdnkealmhtvspeniahrvgvgvrhagddgsa
afripglattnkgtllgvydvrynssvdlqehvdvglsrsvdggktwekmrlplafgetg
glpaaqngvgdpsilvdtktnttwvvaawthgmgnqrawwssypgmdmnhtaqlvlskst
ddgktwsepinitdqvkdpswyfllqgpgrgitmqdgtlvfpiqfidstrvpnagimysk
drgetwkihnyartntteaqvaevepgvlmlnmrdnrggsravattkdlgktwtehpssr
kalqepvcmaslisvkaadntlnkdillfsnpntvkgrhhitikasldggitwlpehqvm
ldegdgwgyscltmidketvgilyessvahmtfqairlrdiiq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4q6kC (C:)
gvtsdtvfvretqipilierqdnvlfmlrlnakesrsldevvlnfgkdvnmadiqsvkly
ysgtearqnygkkfftpvsyisshtpgktlaanpsysinksqvnnpgrkvilnanqklfp
ginyfwislqmkpgaslldkvsakivtvkvdnkealmhtvspeniahrvgvgvrhagddg
saafripglattnkgtllgvydvrynssvdlqehvdvglsrsvdggktwekmrlplafge
tgglpaaqngvgdpsilvdtktnttwvvaawthgmgnqrawwssypgmdmnhtaqlvlsk
stddgktwsepinitdqvkdpswyfllqgpgrgitmqdgtlvfpiqfidstrvpnagimy
skdrgetwkihnyartntteaqvaevepgvlmlnmrdnrggsravattkdlgktwtehps
srkalqepvcmaslisvkaadntlnkdillfsnpntvkgrhhitikasldggitwlpehq
vmldegdgwgyscltmidketvgilyessvahmtfqairlrdiiq

    Sequence, based on observed residues (ATOM records):
    >4q6kC (C:)
tsdtvfvretqipilierqdnvlfmlrlnakesrsldevvlnfgkdvnmadiqsvklyys
gtearqnygkkfftpvsyisshtpgktlaanpsysinksqvnnpgrkvilnanqklfpgi
nyfwislqmkpgaslldkvsakivtvkvdnkealmhtvspeniahrvgvgvrhagddgsa
afripglattnkgtllgvydvrynssvdlqehvdvglsrsvdggktwekmrlplafgetg
glpaaqngvgdpsilvdtktnttwvvaawthgmgnqrawwssypgmdmnhtaqlvlskst
ddgktwsepinitdqvkdpswyfllqgpgrgitmqdgtlvfpiqfidstrvpnagimysk
drgetwkihnyartntteaqvaevepgvlmlnmrdnrggsravattkdlgktwtehpssr
kalqepvcmaslisvkaadntlnkdillfsnpntvkgrhhitikasldggitwlpehqvm
ldegdgwgyscltmidketvgilyessvahmtfqairlrdiiq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4q6kD (D:)
gvtsdtvfvretqipilierqdnvlfmlrlnakesrsldevvlnfgkdvnmadiqsvkly
ysgtearqnygkkfftpvsyisshtpgktlaanpsysinksqvnnpgrkvilnanqklfp
ginyfwislqmkpgaslldkvsakivtvkvdnkealmhtvspeniahrvgvgvrhagddg
saafripglattnkgtllgvydvrynssvdlqehvdvglsrsvdggktwekmrlplafge
tgglpaaqngvgdpsilvdtktnttwvvaawthgmgnqrawwssypgmdmnhtaqlvlsk
stddgktwsepinitdqvkdpswyfllqgpgrgitmqdgtlvfpiqfidstrvpnagimy
skdrgetwkihnyartntteaqvaevepgvlmlnmrdnrggsravattkdlgktwtehps
srkalqepvcmaslisvkaadntlnkdillfsnpntvkgrhhitikasldggitwlpehq
vmldegdgwgyscltmidketvgilyessvahmtfqairlrdiiq

    Sequence, based on observed residues (ATOM records):
    >4q6kD (D:)
tsdtvfvretqipilierqdnvlfmlrlnakesrsldevvlnfgkdvnmadiqsvklyys
gtearqnygkkfftpvsyisshtpgktlaanpsysinksqvnnpgrkvilnanqklfpgi
nyfwislqmkpgaslldkvsakivtvkvdnkealmhtvspeniahrvgvgvrhagddgsa
afripglattnkgtllgvydvrynssvdlqehvdvglsrsvdggktwekmrlplafgetg
glpaaqngvgdpsilvdtktnttwvvaawthgmgnqrawwssypgmdmnhtaqlvlskst
ddgktwsepinitdqvkdpswyfllqgpgrgitmqdgtlvfpiqfidstrvpnagimysk
drgetwkihnyartntteaqvaevepgvlmlnmrdnrggsravattkdlgktwtehpssr
kalqepvcmaslisvkaadntlnkdillfsnpntvkgrhhitikasldggitwlpehqvm
ldegdgwgyscltmidketvgilyessvahmtfqairlrdiiq