PDB entry 4q66

View 4q66 on RCSB PDB site
Description: Structure of Exomer bound to Arf1.
Deposited on 2014-04-21, released 2014-09-17
The last revision was dated 2014-12-31, with a file datestamp of 2014-12-26.
Experiment type: XRAY
Resolution: 3.35 Å
R-factor: 0.28
AEROSPACI score: 0.08 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Chs5p
    Species: Saccharomyces cerevisiae R008 [TaxId:1182966]
    Gene: CAL3, Chs5, L8543.18, R008_L12446, YLR330W
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Protein BCH1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: BCH1, YMR237W, YM9959.19
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: ADP-ribosylation factor 1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: ARF1, YDL192W, D1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11076
      • engineered mutation (64)
  • Chain 'D':
    Compound: Chs5p
    Species: Saccharomyces cerevisiae R008 [TaxId:1182966]
    Gene: CAL3, Chs5, L8543.18, R008_L12446, YLR330W
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Protein BCH1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: BCH1, YMR237W, YM9959.19
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: ADP-ribosylation factor 1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: ARF1, YDL192W, D1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11076 (11-End)
      • engineered mutation (64)
  • Chain 'G':
    Compound: Chs5p
    Species: Saccharomyces cerevisiae R008 [TaxId:1182966]
    Gene: CAL3, Chs5, L8543.18, R008_L12446, YLR330W
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: Protein BCH1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: BCH1, YMR237W, YM9959.19
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: ADP-ribosylation factor 1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: ARF1, YDL192W, D1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11076
      • engineered mutation (64)
  • Chain 'J':
    Compound: Chs5p
    Species: Saccharomyces cerevisiae R008 [TaxId:1182966]
    Gene: CAL3, Chs5, L8543.18, R008_L12446, YLR330W
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: Protein BCH1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: BCH1, YMR237W, YM9959.19
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: ADP-ribosylation factor 1
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: ARF1, YDL192W, D1244
    Database cross-references and differences (RAF-indexed):
    • Uniprot P11076 (11-End)
      • engineered mutation (64)
  • Heterogens: GNP, MG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4q66A (A:)
mdpefssvdvlltvgkldaslallttqdhhviefptvllpenvkagsiikmqvsqnleee
kkqrnhfksiqakilekygthkpespvlkivnvtqtscvlawdplklgsaklkslilyrk
girsmvipnpfkvtttkisglsvdtpyefqlklittsgtlwsekvilrthkmtdmsgitv
clgpldplkeisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnn
ipivrpewvracevekrivgvrgfyldadqsilksytfppvneeelsyskenepvaevad
enkmpedttdveqvashndnegnpseakeqgeksgheaapvspaedplhastalenetti
etvnpsvr

    Sequence, based on observed residues (ATOM records):
    >4q66A (A:)
ssvdvlltvgkldaslallttqdhhviefptvllpenvkagsiikmqvsqnleeekkqrn
hfksiqakilekygthkpespvlkivnvtqtscvlawdplklgsaklkslilyrkgirsm
vipnpfkvtttkisglsvdtpyefqlklittsgtlwsekvilrthkmtdmsgitvclqrh
vaidtthfvlirakhnniprpwvracevekrivgfyldadqstfpp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4q66B (B:)
mlsqtsipevkedvigyalhqrrarvgqfqdlgppdlitlikslpsssstttatasandn
gatsningqdpttivtelhshdklkgqigtffycmgidtsdptsitifakkitdlfldtp
qiwfgkkkhfhvskisisswnafrkydvniivhipgtvqtyiinsdgeqsqlpsvaeass
grnsqdlnvnmiwaetfmsgivrdimimkdnradgesqnlvetlifnpftsgeledvann
fiklfplvyekgvyldapthvlnpsltnnylvetlveivrltksleacrkmlkklieihp
eaviilirvyfacdleidavdlineqlnspssfladdsktshiqlifksellsiqsefll
dvkrdyklakevameavncapnefktwylltriyiklndmsnallslnacpmsqvkekyv
lrriapitsdenlhlplpldasieeisslnpmdvqleqksadpnlvnlsasslkstfqla
ykllteivqitgweqllkyrskifvmedeyqgstssideaevrgndiskmrskrlcerwl
dnlfmllyedlktytdwqseqlyfdaqnskyhkltvewelfglcakrlghlpeaakafqi
glsqrfspvcaknllqfyidehkrirrdsvsanseltssqilssindidssiidlvvkic
cwnhrwyiefsiilidalsvavqdmgitkvhneiasrfsdpvaqliddnilnflknftnd
tfdngtenlyfqghhhhhh

    Sequence, based on observed residues (ATOM records):
    >4q66B (B:)
sqtsipevqrrarvgqfdlgpdliffycmgidtsdptsitifasswnafrkydvvnmiwa
etfmsgivrdimimkdnradgesqnlvetlifnpftledvannfiklfplvyekgvylda
pthvnpsltnnylvetlveivrltksleacrkmlkklieihpeaviilirvyfacdleid
avdlineqlnspssflshiqlifksellsiqseflldvkrdyklakevameavncapnef
ktwylltriyiklndmsnallslnacpmsqvkekyvliapilhlplpldleqksdpnlvn
lsasslkstfqlaykllteivqitgweqllkyrskifvkrlcerwldnlfmllyedlkty
tdwqsekltvewelfglcakrlghlpeaakafqiglsqrfspvcaknllqfyidehkrir
rdsvstssqilssindidssiidlvvkiccwnhrwyiefiilidalsvavqdmgkvhnei
asrfsdpvaqliddnilnflknftndt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4q66C (C:)
mtenlyfqgsgmrilmvgldgagkttvlyklklgevittiptigfnvetvqyknisftvw
dvggldrirslwrhyyrntegvifvvdsndrsrigearevmqrmlnedelrnaawlvfan
kqdlpeamsaaeiteklglhsirnrpwfiqatcatsgeglyeglewlsnslknst

    Sequence, based on observed residues (ATOM records):
    >4q66C (C:)
ilmvgldgagkttvlyklklgevittiptigfnvetvsftvwdvggldrirslwrhyyrn
tgvifvvdsndrsrigearevmqlnedelrvfankqdlpeamsaaeiteklgwfiqatca
tsgeglyeglewls

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4q66D (D:)
mdpefssvdvlltvgkldaslallttqdhhviefptvllpenvkagsiikmqvsqnleee
kkqrnhfksiqakilekygthkpespvlkivnvtqtscvlawdplklgsaklkslilyrk
girsmvipnpfkvtttkisglsvdtpyefqlklittsgtlwsekvilrthkmtdmsgitv
clgpldplkeisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnn
ipivrpewvracevekrivgvrgfyldadqsilksytfppvneeelsyskenepvaevad
enkmpedttdveqvashndnegnpseakeqgeksgheaapvspaedplhastalenetti
etvnpsvr

    Sequence, based on observed residues (ATOM records):
    >4q66D (D:)
vdvlltvgkldaslallttqdhhviefptvllpenvkagsiikmqvsqnleeekkqrnhf
ksiqakilekygthkpespvlkivnvtqtscvlawdplklgsaklkslilyrrsmvipnp
fkvtttkisglvdtpyefqlklittsgtlwsekvilrthkmthvrgfylda

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4q66E (E:)
mlsqtsipevkedvigyalhqrrarvgqfqdlgppdlitlikslpsssstttatasandn
gatsningqdpttivtelhshdklkgqigtffycmgidtsdptsitifakkitdlfldtp
qiwfgkkkhfhvskisisswnafrkydvniivhipgtvqtyiinsdgeqsqlpsvaeass
grnsqdlnvnmiwaetfmsgivrdimimkdnradgesqnlvetlifnpftsgeledvann
fiklfplvyekgvyldapthvlnpsltnnylvetlveivrltksleacrkmlkklieihp
eaviilirvyfacdleidavdlineqlnspssfladdsktshiqlifksellsiqsefll
dvkrdyklakevameavncapnefktwylltriyiklndmsnallslnacpmsqvkekyv
lrriapitsdenlhlplpldasieeisslnpmdvqleqksadpnlvnlsasslkstfqla
ykllteivqitgweqllkyrskifvmedeyqgstssideaevrgndiskmrskrlcerwl
dnlfmllyedlktytdwqseqlyfdaqnskyhkltvewelfglcakrlghlpeaakafqi
glsqrfspvcaknllqfyidehkrirrdsvsanseltssqilssindidssiidlvvkic
cwnhrwyiefsiilidalsvavqdmgitkvhneiasrfsdpvaqliddnilnflknftnd
tfdngtenlyfqghhhhhh

    Sequence, based on observed residues (ATOM records):
    >4q66E (E:)
lsqtsipevkvigyalhqrrarvgdlgppdliffycmgidtsdptsitifakkitdlfld
tpqisisswnafrkydvniivvqtyiinsnvnmiwaetfmsgivrdimimkdnradgesq
nlvetlifnpftsgdvannfiklfplvyekgvyldapthvlnpsltnnylvetlveivrl
tksleacrkmlkklieihpeaviilirvyfacdleidavdlineqlnspssfladtshiq
lifksellsiqseflldvkrdyklakevameavncapnefktwylltriyiklndmsnal
lslnacpmsqvkekyvlrapilhlplpnpmdvqleqksadpnlvnlsasslkstfqlayk
llteivqitgweqllkyrskifvskrlcerwldnlfmllyedlktytdwqseqlkltvew
elfglcakrlghlpeaakafqiglsqrfspvcaknllqfyidehkrirrdstssqilssi
ndidssiidlvvkiccwnhrwyiefsiilidalsvavqdmgitkvhneiasrfsdpvaql
iddnilnflknftndtf

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4q66F (F:)
mtenlyfqgsgmrilmvgldgagkttvlyklklgevittiptigfnvetvqyknisftvw
dvggldrirslwrhyyrntegvifvvdsndrsrigearevmqrmlnedelrnaawlvfan
kqdlpeamsaaeiteklglhsirnrpwfiqatcatsgeglyeglewlsnslknst

    Sequence, based on observed residues (ATOM records):
    >4q66F (F:)
mrilmvgldgagkttvlyklkptigfnvetvqykftvwdvggldrirslwrhyyrntegv
ifvvdsndrsrigearevmqrmlnedelrnaawlvfankqdlpeamsaaeiteklglhsi
rpwfiqatcatsgeglyeglewlsns

  • Chain 'G':
    Sequence, based on SEQRES records:
    >4q66G (G:)
mdpefssvdvlltvgkldaslallttqdhhviefptvllpenvkagsiikmqvsqnleee
kkqrnhfksiqakilekygthkpespvlkivnvtqtscvlawdplklgsaklkslilyrk
girsmvipnpfkvtttkisglsvdtpyefqlklittsgtlwsekvilrthkmtdmsgitv
clgpldplkeisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnn
ipivrpewvracevekrivgvrgfyldadqsilksytfppvneeelsyskenepvaevad
enkmpedttdveqvashndnegnpseakeqgeksgheaapvspaedplhastalenetti
etvnpsvr

    Sequence, based on observed residues (ATOM records):
    >4q66G (G:)
svdvlltvgkldaslallttqdhhviefptvllpenvkagsiikmqvsqnleeekkqrnh
fksiqakilekygtpespvlkivnvtqtscvlawdplklaklkslilyrkgsmvipnpfk
vtttkisglsvdtpyefqlklittsgtlwsekvilrthkmtdmsgitvsdlqisqclshi
gavaidtthfvelirakhnnipivrpewvra

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4q66H (H:)
mlsqtsipevkedvigyalhqrrarvgqfqdlgppdlitlikslpsssstttatasandn
gatsningqdpttivtelhshdklkgqigtffycmgidtsdptsitifakkitdlfldtp
qiwfgkkkhfhvskisisswnafrkydvniivhipgtvqtyiinsdgeqsqlpsvaeass
grnsqdlnvnmiwaetfmsgivrdimimkdnradgesqnlvetlifnpftsgeledvann
fiklfplvyekgvyldapthvlnpsltnnylvetlveivrltksleacrkmlkklieihp
eaviilirvyfacdleidavdlineqlnspssfladdsktshiqlifksellsiqsefll
dvkrdyklakevameavncapnefktwylltriyiklndmsnallslnacpmsqvkekyv
lrriapitsdenlhlplpldasieeisslnpmdvqleqksadpnlvnlsasslkstfqla
ykllteivqitgweqllkyrskifvmedeyqgstssideaevrgndiskmrskrlcerwl
dnlfmllyedlktytdwqseqlyfdaqnskyhkltvewelfglcakrlghlpeaakafqi
glsqrfspvcaknllqfyidehkrirrdsvsanseltssqilssindidssiidlvvkic
cwnhrwyiefsiilidalsvavqdmgitkvhneiasrfsdpvaqliddnilnflknftnd
tfdngtenlyfqghhhhhh

    Sequence, based on observed residues (ATOM records):
    >4q66H (H:)
vnmiwaetmsgivrdimimkdnradgesqnlnpftsgkgvyldapthvlnpsltnnylve
tleivrltksleacrkmlkliepeaviilirvyfacdleidavdlineqltshiqlifks
ellsiqseflldvkrdyklakevameavncapnefktwylltriyiklndmsnallslna
cpmsqvkstfqlaykllteivqitgweqllkyrskifvkrlcerwldnlfmllyedlkty
tdwqsfglcakrlgpeaakaspvcaknllqfyidehkrirssindidssiidlvvkiccw
nhfsiilidalsvavqgitkvhneiapvaqliiltndt

  • Chain 'I':
    Sequence, based on SEQRES records:
    >4q66I (I:)
mtenlyfqgsgmrilmvgldgagkttvlyklklgevittiptigfnvetvqyknisftvw
dvggldrirslwrhyyrntegvifvvdsndrsrigearevmqrmlnedelrnaawlvfan
kqdlpeamsaaeiteklglhsirnrpwfiqatcatsgeglyeglewlsnslknst

    Sequence, based on observed residues (ATOM records):
    >4q66I (I:)
lmvgldgakttvlyklklgvittiptggldrirslwrhyyvifvvdsnrevmqrmlvfan
kqdaaeiteklglatcatsgeglyeg

  • Chain 'J':
    Sequence, based on SEQRES records:
    >4q66J (J:)
mdpefssvdvlltvgkldaslallttqdhhviefptvllpenvkagsiikmqvsqnleee
kkqrnhfksiqakilekygthkpespvlkivnvtqtscvlawdplklgsaklkslilyrk
girsmvipnpfkvtttkisglsvdtpyefqlklittsgtlwsekvilrthkmtdmsgitv
clgpldplkeisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnn
ipivrpewvracevekrivgvrgfyldadqsilksytfppvneeelsyskenepvaevad
enkmpedttdveqvashndnegnpseakeqgeksgheaapvspaedplhastalenetti
etvnpsvr

    Sequence, based on observed residues (ATOM records):
    >4q66J (J:)
vdvlltvgkldaslallttqdhhviefptvllpenvkagsiikmqvsqnleeekkqrnhf
ksiqakilekygthkpespvlivnvtscvlawdplklgsaklkslilyrkgirsmvipnp
fkvtttkisglsvdtefqlklittsgtlwsekvilrth

  • Chain 'K':
    Sequence, based on SEQRES records:
    >4q66K (K:)
mlsqtsipevkedvigyalhqrrarvgqfqdlgppdlitlikslpsssstttatasandn
gatsningqdpttivtelhshdklkgqigtffycmgidtsdptsitifakkitdlfldtp
qiwfgkkkhfhvskisisswnafrkydvniivhipgtvqtyiinsdgeqsqlpsvaeass
grnsqdlnvnmiwaetfmsgivrdimimkdnradgesqnlvetlifnpftsgeledvann
fiklfplvyekgvyldapthvlnpsltnnylvetlveivrltksleacrkmlkklieihp
eaviilirvyfacdleidavdlineqlnspssfladdsktshiqlifksellsiqsefll
dvkrdyklakevameavncapnefktwylltriyiklndmsnallslnacpmsqvkekyv
lrriapitsdenlhlplpldasieeisslnpmdvqleqksadpnlvnlsasslkstfqla
ykllteivqitgweqllkyrskifvmedeyqgstssideaevrgndiskmrskrlcerwl
dnlfmllyedlktytdwqseqlyfdaqnskyhkltvewelfglcakrlghlpeaakafqi
glsqrfspvcaknllqfyidehkrirrdsvsanseltssqilssindidssiidlvvkic
cwnhrwyiefsiilidalsvavqdmgitkvhneiasrfsdpvaqliddnilnflknftnd
tfdngtenlyfqghhhhhh

    Sequence, based on observed residues (ATOM records):
    >4q66K (K:)
sqtsipevkedvigyalhqrrarvgqfqdlgppdliffycmgidtsdptsitifakkitd
lfldtpqiwfgkkhfhvskisisswnafrkydvniivhvqtyiinsdgeqsqlpsvlnvn
miwaetfmsgivrdimimkdnradgesqnlvetlifnpftsgeledvannfiklfplvye
kgvyldapthvlnpsltnnylvetlveivrltksleacrkmlkklieihpeaviilirvy
facdledavdlineqlnspssfladtshiqlifksellsiqseflldvkrdyklakevam
eavncapnefktwylltriyiklndmsnallslnacpmsvkekyvlrriapienlhlplp
ldnpmdvqleqksadpnlvnlsasslkstfqlaykllteivqitgweqllkyrskifvms
krlcerwldnlfmllyedlktytdwqseqlyfdahkltvewelfglcakrlghlpeaaka
fqiglsqrfspvcaknllqfyidehkrirrdslssindidssiidlvvkiccwnhrwyie
fsiilidalsvavqdmgitkvhneiasrfsdpvaqliddnilnflknftndtf

  • Chain 'L':
    Sequence, based on SEQRES records:
    >4q66L (L:)
mtenlyfqgsgmrilmvgldgagkttvlyklklgevittiptigfnvetvqyknisftvw
dvggldrirslwrhyyrntegvifvvdsndrsrigearevmqrmlnedelrnaawlvfan
kqdlpeamsaaeiteklglhsirnrpwfiqatcatsgeglyeglewlsnslknst

    Sequence, based on observed residues (ATOM records):
    >4q66L (L:)
mrilmvgldgagkttvlyklklgttiptigfnvetvftvwdvggldrirslwrhyyrnte
gvifvvdsndrsrigearevmqrmlnedelrnaawlvfankeamsaaeitekllhsirpw
fiqatcaglyeglewlsns