PDB entry 4q33

View 4q33 on RCSB PDB site
Description: Crystal Structure of Inosine 5'-monophosphate Dehydrogenase from Clostridium perfringens Complexed with IMP and A110
Class: oxidoreductase
Keywords: structural genomics, NIAID, National Institute of Allergy and Infectious Diseases, Center for Structural Genomics of Infectious Diseases, CSGID, TIM barrel, dehydrogenase, OXIDOREDUCTASE
Deposited on 2014-04-10, released 2014-07-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-07-26, with a file datestamp of 2017-07-21.
Experiment type: XRAY
Resolution: 2.89 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: inosine-5'-monophosphate dehydrogenase
    Species: Clostridium perfringens [TaxId:195103]
    Gene: CPF_2558, guaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0TN42 (3-90)
    • Uniprot Q0TN42 (94-End)
      • linker (91-93)
    Domains in SCOPe 2.08: d4q33a_
  • Chain 'B':
    Compound: inosine-5'-monophosphate dehydrogenase
    Species: Clostridium perfringens [TaxId:195103]
    Gene: CPF_2558, guaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0TN42 (Start-90)
    • Uniprot Q0TN42 (94-End)
      • linker (91-93)
    Domains in SCOPe 2.08: d4q33b_
  • Chain 'C':
    Compound: inosine-5'-monophosphate dehydrogenase
    Species: Clostridium perfringens [TaxId:195103]
    Gene: CPF_2558, guaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0TN42 (Start-90)
    • Uniprot Q0TN42 (94-End)
      • linker (91-93)
    Domains in SCOPe 2.08: d4q33c_
  • Chain 'D':
    Compound: inosine-5'-monophosphate dehydrogenase
    Species: Clostridium perfringens [TaxId:195103]
    Gene: CPF_2558, guaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0TN42 (Start-90)
    • Uniprot Q0TN42 (94-End)
      • linker (91-93)
    Domains in SCOPe 2.08: d4q33d_
  • Chain 'E':
    Compound: inosine-5'-monophosphate dehydrogenase
    Species: Clostridium perfringens [TaxId:195103]
    Gene: CPF_2558, guaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0TN42 (Start-90)
    • Uniprot Q0TN42 (94-End)
      • linker (91-93)
    Domains in SCOPe 2.08: d4q33e_
  • Chain 'F':
    Compound: inosine-5'-monophosphate dehydrogenase
    Species: Clostridium perfringens [TaxId:195103]
    Gene: CPF_2558, guaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0TN42 (Start-90)
    • Uniprot Q0TN42 (94-End)
      • linker (91-93)
    Domains in SCOPe 2.08: d4q33f_
  • Chain 'G':
    Compound: inosine-5'-monophosphate dehydrogenase
    Species: Clostridium perfringens [TaxId:195103]
    Gene: CPF_2558, guaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0TN42 (Start-90)
    • Uniprot Q0TN42 (94-End)
      • linker (91-93)
    Domains in SCOPe 2.08: d4q33g_
  • Chain 'H':
    Compound: inosine-5'-monophosphate dehydrogenase
    Species: Clostridium perfringens [TaxId:195103]
    Gene: CPF_2558, guaB
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q0TN42 (Start-90)
    • Uniprot Q0TN42 (94-End)
      • linker (91-93)
    Domains in SCOPe 2.08: d4q33h_
  • Heterogens: IMP, 2YA, ACY, FMT, SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4q33A (A:)
    snamarilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskm
    aiamareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvd
    vivldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgs
    icttrivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsi
    fagceeapgaieiyqgrsykvyrgmgslgamakgssdryfqngtkkfvpegvegriaykg
    hladtiyqliggiksgmgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    vnq
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q33A (A:)
    marilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskmaia
    mareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvdviv
    ldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgsict
    trivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsifag
    ceeapgaieiyqgrsykvyrgmgslgamakfvpegvegriaykghladtiyqliggiksg
    mgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4q33B (B:)
    snamarilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskm
    aiamareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvd
    vivldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgs
    icttrivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsi
    fagceeapgaieiyqgrsykvyrgmgslgamakgssdryfqngtkkfvpegvegriaykg
    hladtiyqliggiksgmgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    vnq
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q33B (B:)
    arilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskmaiam
    areggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvdvivl
    dtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgsictt
    rivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsifagc
    eeapgaieiyqgrsykvyrgmgslgamafvpegvegriaykghladtiyqliggiksgmg
    ylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4q33C (C:)
    snamarilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskm
    aiamareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvd
    vivldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgs
    icttrivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsi
    fagceeapgaieiyqgrsykvyrgmgslgamakgssdryfqngtkkfvpegvegriaykg
    hladtiyqliggiksgmgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    vnq
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q33C (C:)
    rilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskmaiama
    reggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvdvivld
    tahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgsicttr
    ivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsifagce
    eapgaieiyqgrsykvyrgmgslgamakfvpegvegriaykghladtiyqliggiksgmg
    ylgaptlenlyenanfvvqtsagfreshphdinitkeapnysv
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4q33D (D:)
    snamarilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskm
    aiamareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvd
    vivldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgs
    icttrivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsi
    fagceeapgaieiyqgrsykvyrgmgslgamakgssdryfqngtkkfvpegvegriaykg
    hladtiyqliggiksgmgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    vnq
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q33D (D:)
    arilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskmaiam
    areggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvdvivl
    dtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgsictt
    rivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsifagc
    eeapgaieiyqgrsykvyrgmgslgamafvpegvegriaykghladtiyqliggiksgmg
    ylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4q33E (E:)
    snamarilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskm
    aiamareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvd
    vivldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgs
    icttrivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsi
    fagceeapgaieiyqgrsykvyrgmgslgamakgssdryfqngtkkfvpegvegriaykg
    hladtiyqliggiksgmgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    vnq
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q33E (E:)
    arilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskmaiam
    areggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvdvivl
    dtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgsictt
    rivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsifagc
    eeapgaieiyqgrsykvyrgmgslgamafvpegvegriaykghladtiyqliggiksgmg
    ylgaptlenlyenanfvvqtsagfreshphdinitkeapnysv
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4q33F (F:)
    snamarilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskm
    aiamareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvd
    vivldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgs
    icttrivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsi
    fagceeapgaieiyqgrsykvyrgmgslgamakgssdryfqngtkkfvpegvegriaykg
    hladtiyqliggiksgmgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    vnq
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q33F (F:)
    arilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskmaiam
    areggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvdvivl
    dtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgsictt
    rivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsifagc
    eeapgaieiyqgrsykvyrgmgslgamakkfvpegvegriaykghladtiyqliggiksg
    mgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4q33G (G:)
    snamarilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskm
    aiamareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvd
    vivldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgs
    icttrivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsi
    fagceeapgaieiyqgrsykvyrgmgslgamakgssdryfqngtkkfvpegvegriaykg
    hladtiyqliggiksgmgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    vnq
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q33G (G:)
    arilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskmaiam
    areggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvdvivl
    dtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgsictt
    rivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsifagc
    eeapgaieiyqgrsykvyrgmgslgamakfvpegvegriaykghladtiyqliggiksgm
    gylgaptlenlyenanfvvqtsagfreshphdinitkeapnysv
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >4q33H (H:)
    snamarilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskm
    aiamareggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvd
    vivldtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgs
    icttrivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsi
    fagceeapgaieiyqgrsykvyrgmgslgamakgssdryfqngtkkfvpegvegriaykg
    hladtiyqliggiksgmgylgaptlenlyenanfvvqtsagfreshphdinitkeapnys
    vnq
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q33H (H:)
    arilktaytfddvllvpnksevlpnevslktqltkkiqlniplmsasmdtvteskmaiam
    areggigiihknmtiedqarevdrvkrsggllcgasigvtndmmervdavvkakvdvivl
    dtahghskgviegvkrikakypelqviagniatpeavrdlaeagadcvkvgigpgsictt
    rivagvgvpqltavmdcaeegkklgipviadgglkysgdivkalaagacaammgsifagc
    eeapgaieiyqgrsykvyrgmgslgamakfvpegvegriaykghladtiyqliggiksgm
    gylgaptlenlyenanfvvqtsagfreshphdinitkeapnysv