PDB entry 4q31

View 4q31 on RCSB PDB site
Description: The crystal structure of cystathione gamma lyase (CalE6) from Micromonospora echinospora
Class: lyase
Keywords: structural genomics, PSI-Biology, protein structure initiative, midwest center for structural genomics, MCSG, Enzyme Discovery for Natural Product Biosynthesis, NatPro, LYASE
Deposited on 2014-04-10, released 2014-05-07
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-05-07, with a file datestamp of 2014-05-02.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.153
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cystathione gamma lyase CalE6
    Species: Micromonospora echinospora [TaxId:1877]
    Gene: calE6
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KNG3
      • engineered mutation (9)
    Domains in SCOPe 2.05: d4q31a_
  • Chain 'B':
    Compound: cystathione gamma lyase CalE6
    Species: Micromonospora echinospora [TaxId:1877]
    Gene: calE6
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KNG3
      • engineered mutation (9)
    Domains in SCOPe 2.05: d4q31b_
  • Chain 'C':
    Compound: cystathione gamma lyase CalE6
    Species: Micromonospora echinospora [TaxId:1877]
    Gene: calE6
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KNG3 (Start-383)
      • engineered mutation (9)
    Domains in SCOPe 2.05: d4q31c_
  • Chain 'D':
    Compound: cystathione gamma lyase CalE6
    Species: Micromonospora echinospora [TaxId:1877]
    Gene: calE6
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KNG3
      • engineered mutation (9)
    Domains in SCOPe 2.05: d4q31d_
  • Chain 'E':
    Compound: cystathione gamma lyase CalE6
    Species: Micromonospora echinospora [TaxId:1877]
    Gene: calE6
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KNG3
      • engineered mutation (9)
    Domains in SCOPe 2.05: d4q31e_
  • Chain 'F':
    Compound: cystathione gamma lyase CalE6
    Species: Micromonospora echinospora [TaxId:1877]
    Gene: calE6
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KNG3
      • engineered mutation (9)
    Domains in SCOPe 2.05: d4q31f_
  • Chain 'G':
    Compound: cystathione gamma lyase CalE6
    Species: Micromonospora echinospora [TaxId:1877]
    Gene: calE6
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KNG3
      • engineered mutation (9)
    Domains in SCOPe 2.05: d4q31g_
  • Chain 'H':
    Compound: cystathione gamma lyase CalE6
    Species: Micromonospora echinospora [TaxId:1877]
    Gene: calE6
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8KNG3
      • engineered mutation (9)
    Domains in SCOPe 2.05: d4q31h_
  • Heterogens: MES, CL, GOL, FMT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4q31A (A:)
    snamsgmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreel
    eeclaglerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrv
    ryadlttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfas
    pvlqqplalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldc
    flvrrglhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapga
    ivsfdylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigesli
    rlsvgiedpqdlaedlsralaggt
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q31A (A:)
    mrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreeleeclag
    lerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrvryadlt
    tpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfaspvlqqp
    lalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldcflvrrg
    lhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapgaivsfdy
    lggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigeslirlsvgi
    edpqdlaedlsralag
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4q31B (B:)
    snamsgmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreel
    eeclaglerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrv
    ryadlttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfas
    pvlqqplalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldc
    flvrrglhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapga
    ivsfdylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigesli
    rlsvgiedpqdlaedlsralaggt
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q31B (B:)
    gmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreeleecla
    glerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrvryadl
    ttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfaspvlqq
    plalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldcflvrr
    glhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapgaivsfd
    ylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigeslirlsvg
    iedpqdlaedlsralagg
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4q31C (C:)
    snamsgmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreel
    eeclaglerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrv
    ryadlttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfas
    pvlqqplalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldc
    flvrrglhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapga
    ivsfdylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigesli
    rlsvgiedpqdlaedlsralaggt
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q31C (C:)
    gmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreeleecla
    glerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrvryadl
    ttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfaspvlqq
    plalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldcflvrr
    glhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapgaivsfd
    ylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigeslirlsvg
    iedpqdlaedlsralaggt
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4q31D (D:)
    snamsgmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreel
    eeclaglerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrv
    ryadlttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfas
    pvlqqplalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldc
    flvrrglhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapga
    ivsfdylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigesli
    rlsvgiedpqdlaedlsralaggt
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q31D (D:)
    mrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreeleeclag
    lerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrvryadlt
    tpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfaspvlqqp
    lalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldcflvrrg
    lhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapgaivsfdy
    lggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigeslirlsvgi
    edpqdlaedlsralag
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4q31E (E:)
    snamsgmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreel
    eeclaglerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrv
    ryadlttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfas
    pvlqqplalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldc
    flvrrglhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapga
    ivsfdylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigesli
    rlsvgiedpqdlaedlsralaggt
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q31E (E:)
    gmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreeleecla
    glerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrvryadl
    ttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfaspvlqq
    plalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldcflvrr
    glhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapgaivsfd
    ylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigeslirlsvg
    iedpqdlaedlsrala
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4q31F (F:)
    snamsgmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreel
    eeclaglerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrv
    ryadlttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfas
    pvlqqplalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldc
    flvrrglhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapga
    ivsfdylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigesli
    rlsvgiedpqdlaedlsralaggt
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q31F (F:)
    gmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreeleecla
    glerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrvryadl
    ttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfaspvlqq
    plalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldcflvrr
    glhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapgaivsfd
    ylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigeslirlsvg
    iedpqdlaedlsralag
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4q31G (G:)
    snamsgmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreel
    eeclaglerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrv
    ryadlttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfas
    pvlqqplalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldc
    flvrrglhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapga
    ivsfdylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigesli
    rlsvgiedpqdlaedlsralaggt
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q31G (G:)
    gmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreeleecla
    glerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrvryadl
    ttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfaspvlqq
    plalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldcflvrr
    glhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapgaivsfd
    ylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigeslirlsvg
    iedpqdlaedlsralagg
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >4q31H (H:)
    snamsgmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreel
    eeclaglerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrv
    ryadlttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfas
    pvlqqplalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldc
    flvrrglhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapga
    ivsfdylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigesli
    rlsvgiedpqdlaedlsralaggt
    

    Sequence, based on observed residues (ATOM records): (download)
    >4q31H (H:)
    gmrfgtrlvhggrrpsagtgdvvppihvsttyerraqdepryfygrgenptreeleecla
    glerapfatvfssgqaaaatllslvrpgqcvvstddvyagtdglfdlaarqgvrvryadl
    ttpegiaaalaepdlalvwietptnplltvvdvaevsrrahergarvvvdntfaspvlqq
    plalgadvslysttksiaghadvlggalvyrdadlhaavrayrttagnvpgaldcflvrr
    glhtlslrvhrqvatarvlverlraspvvgavhypglpehpqhavvkaqmsapgaivsfd
    ylggpaerlldrftlftcgvslggvhslvecpalmthrplsaeararrgigeslirlsvg
    iedpqdlaedlsralagg