PDB entry 4q2o

View 4q2o on RCSB PDB site
Description: PDLIM4 PDZ in Complex with a Phage-Derived Peptide
Class: protein binding
Keywords: pdz, protein binding
Deposited on 2014-04-09, released 2014-09-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-11-26, with a file datestamp of 2014-11-21.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.25
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: pdz and lim domain protein 4
    Species: Homo sapiens [TaxId:9606]
    Gene: PDLIM4, RIL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50479 (3-86)
      • linker (89-91)
      • see remark 999 (92-97)
    Domains in SCOPe 2.08: d4q2oa_
  • Chain 'B':
    Compound: pdz and lim domain protein 4
    Species: Homo sapiens [TaxId:9606]
    Gene: PDLIM4, RIL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50479 (3-End)
      • see remark 999 (92-97)
    Domains in SCOPe 2.08: d4q2ob_
  • Chain 'C':
    Compound: pdz and lim domain protein 4
    Species: Homo sapiens [TaxId:9606]
    Gene: PDLIM4, RIL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50479 (3-End)
      • see remark 999 (93-97)
    Domains in SCOPe 2.08: d4q2oc_
  • Chain 'D':
    Compound: pdz and lim domain protein 4
    Species: Homo sapiens [TaxId:9606]
    Gene: PDLIM4, RIL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50479 (3-End)
      • see remark 999 (92-97)
    Domains in SCOPe 2.08: d4q2od_
  • Chain 'E':
    Compound: pdz and lim domain protein 4
    Species: Homo sapiens [TaxId:9606]
    Gene: PDLIM4, RIL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50479
      • see remark 999 (93-97)
    Domains in SCOPe 2.08: d4q2oe_
  • Chain 'F':
    Compound: pdz and lim domain protein 4
    Species: Homo sapiens [TaxId:9606]
    Gene: PDLIM4, RIL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50479 (3-86)
      • linker (89-91)
      • see remark 999 (92-97)
    Domains in SCOPe 2.08: d4q2of_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4q2oA (A:)
gshmphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingest
elmthleaqnrikgchdhltlsvsrpeaagggvespwl

    Sequence, based on observed residues (ATOM records): (download) 
    >4q2oA (A:)
mphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingestelm
thleaqnrikgcdhltlsvsrpegggvespwl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4q2oB (B:)
gshmphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingest
elmthleaqnrikgchdhltlsvsrpeaagggvespwl

    Sequence, based on observed residues (ATOM records): (download) 
    >4q2oB (B:)
mphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingestelm
thleaqnrikgchdhltlsvsrpvespwl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4q2oC (C:)
gshmphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingest
elmthleaqnrikgchdhltlsvsrpeaagggvespwl

    Sequence, based on observed residues (ATOM records): (download) 
    >4q2oC (C:)
mphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingestelm
thleaqnrikgchdhltlsvsrpespwl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4q2oD (D:)
gshmphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingest
elmthleaqnrikgchdhltlsvsrpeaagggvespwl

    Sequence, based on observed residues (ATOM records): (download) 
    >4q2oD (D:)
mphsvtlrgpspwgfrlvggpltisrvhagskaalaalcpgdliqaingestelmthlea
qnrikgchdhltlsvsrpvespwl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4q2oE (E:)
gshmphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingest
elmthleaqnrikgchdhltlsvsrpeaagggvespwl

    Sequence, based on observed residues (ATOM records): (download) 
    >4q2oE (E:)
hsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingestelmth
leaqnrikgchdhltlsvsrpespwl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4q2oF (F:)
gshmphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingest
elmthleaqnrikgchdhltlsvsrpeaagggvespwl

    Sequence, based on observed residues (ATOM records): (download) 
    >4q2oF (F:)
mphsvtlrgpspwgfrlvggrdfsapltisrvhagskaalaalcpgdliqaingestelm
thleaqnrikgcdhltlsvsrpegggvespwl