PDB entry 4q0c

View 4q0c on RCSB PDB site
Description: 3.1 a resolution crystal structure of the b. pertussis bvgs periplasmic domain
Deposited on 2014-04-01, released 2015-02-11
The last revision was dated 2015-03-25, with a file datestamp of 2015-03-20.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Virulence sensor protein bvgS
    Species: Bordetella pertussis [TaxId:257313]
    Gene: BP1877, bvgS, bvgS (BP1877)
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16575 (Start-576)
      • expression tag (577)
  • Chain 'B':
    Compound: Virulence sensor protein bvgS
    Species: Bordetella pertussis [TaxId:257313]
    Gene: BP1877, bvgS, bvgS (BP1877)
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16575 (Start-576)
      • expression tag (577)
  • Chain 'C':
    Compound: Virulence sensor protein bvgS
    Species: Bordetella pertussis [TaxId:257313]
    Gene: BP1877, bvgS, bvgS (BP1877)
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16575 (Start-576)
      • expression tag (577)
  • Chain 'D':
    Compound: Virulence sensor protein bvgS
    Species: Bordetella pertussis [TaxId:257313]
    Gene: BP1877, bvgS, bvgS (BP1877)
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16575 (Start-576)
      • expression tag (577)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4q0cA (A:)
mqyklalngktlkgettteavdaataekvfkqyandngvdgewtyddatktftvtelvpr
gsaqasqeltlvgkaavpdvevaldgddwrwlarkrvltlgvyapdippfdvtygeryeg
ltadymaiiahnlgmqakvlryptreqalsalesgqidligtvngtdgrqqslrlsvpya
adhpvivmpigarhvpasnlagqrlavdinylpketlaraypqatlhyfpsseqalaava
ygqadvfigdalttshlvsqsyfndvrvvapahiatggesfgvradntrllrvvnavlea
ippsehrsliyrwglgssisldfahpaysareqqwmadhpvvkvavlnlfapftlfrtde
qfggisaavlqllqlrtgldfeiigvdtveeliaklrsgeadmagalfvnsaresflsfs
rpyvrngmvivtrqdpdapvdadhldgrtvalvrnsaaipllqrrypqakvvtadnpsea
mlmvangqadavvqtqisasyyvnryfagklriasaldlppaeialattrgqtelmsiln
kalysisndelasiisrwrgsdgdprtwyayrneiylehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4q0cA (A:)
sqeltlvgkaavpdvevaldgddwrwlarkrvltlgvyapdippfdvtygeryegltady
maiiahnlgmqakvlryptreqalsalesgqidligtvngtdgrqqslrlsvpyaadhpv
ivmpigarhvpasnlagqrlavdinylpketlaraypqatlhyfpsseqalaavaygqad
vfigdalttshlvsqsyfndvrvvapahiatggesfgvradntrllrvvnavleaippse
hrsliyrwglgssisldfahpaysareqqwmadhpvvkvavlnlfapftlfrtdeqfggi
saavlqllqlrtgldfeiigvdtveeliaklrsgeadmagalfvnsaresflsfsrpyvr
ngmvivtrqdpdapvdadhldgrtvalvrnsaaipllqrrypqakvvtadnpseamlmva
ngqadavvqtqisasyyvnryfagklriasaldlppaeialattrgqtelmsilnkalys
isndelasiisrwrgsdgdprtwyayrneiyle

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4q0cB (B:)
mqyklalngktlkgettteavdaataekvfkqyandngvdgewtyddatktftvtelvpr
gsaqasqeltlvgkaavpdvevaldgddwrwlarkrvltlgvyapdippfdvtygeryeg
ltadymaiiahnlgmqakvlryptreqalsalesgqidligtvngtdgrqqslrlsvpya
adhpvivmpigarhvpasnlagqrlavdinylpketlaraypqatlhyfpsseqalaava
ygqadvfigdalttshlvsqsyfndvrvvapahiatggesfgvradntrllrvvnavlea
ippsehrsliyrwglgssisldfahpaysareqqwmadhpvvkvavlnlfapftlfrtde
qfggisaavlqllqlrtgldfeiigvdtveeliaklrsgeadmagalfvnsaresflsfs
rpyvrngmvivtrqdpdapvdadhldgrtvalvrnsaaipllqrrypqakvvtadnpsea
mlmvangqadavvqtqisasyyvnryfagklriasaldlppaeialattrgqtelmsiln
kalysisndelasiisrwrgsdgdprtwyayrneiylehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4q0cB (B:)
sqeltlvgkaavpdvevaldgddwrwlarkrvltlgvyapdippfdvtygeryegltady
maiiahnlgmqakvlryptreqalsalesgqidligtvngtdgrqqslrlsvpyaadhpv
ivmpigarhvpasnlagqrlavdinylpketlaraypqatlhyfpsseqalaavaygqad
vfigdalttshlvsqsyfndvrvvapahiatggesfgvradntrllrvvnavleaippse
hrsliyrwglgssisldfahpaysareqqwmadhpvvkvavlnlfapftlfrtdeqfggi
saavlqllqlrtgldfeiigvdtveeliaklrsgeadmagalfvnsaresflsfsrpyvr
ngmvivtrqdpdapvdadhldgrtvalvrnsaaipllqrrypqakvvtadnpseamlmva
ngqadavvqtqisasyyvnryfagklriasaldlppaeialattrgqtelmsilnkalys
isndelasiisrwrgsdgdprtwyayrneiyle

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4q0cC (C:)
mqyklalngktlkgettteavdaataekvfkqyandngvdgewtyddatktftvtelvpr
gsaqasqeltlvgkaavpdvevaldgddwrwlarkrvltlgvyapdippfdvtygeryeg
ltadymaiiahnlgmqakvlryptreqalsalesgqidligtvngtdgrqqslrlsvpya
adhpvivmpigarhvpasnlagqrlavdinylpketlaraypqatlhyfpsseqalaava
ygqadvfigdalttshlvsqsyfndvrvvapahiatggesfgvradntrllrvvnavlea
ippsehrsliyrwglgssisldfahpaysareqqwmadhpvvkvavlnlfapftlfrtde
qfggisaavlqllqlrtgldfeiigvdtveeliaklrsgeadmagalfvnsaresflsfs
rpyvrngmvivtrqdpdapvdadhldgrtvalvrnsaaipllqrrypqakvvtadnpsea
mlmvangqadavvqtqisasyyvnryfagklriasaldlppaeialattrgqtelmsiln
kalysisndelasiisrwrgsdgdprtwyayrneiylehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4q0cC (C:)
sqeltlvgkaavpdvevaldgddwrwlarkrvltlgvyapdippfdvtygeryegltady
maiiahnlgmqakvlryptreqalsalesgqidligtvngtdgrqqslrlsvpyaadhpv
ivmpigarhvpasnlagqrlavdinylpketlaraypqatlhyfpsseqalaavaygqad
vfigdalttshlvsqsyfndvrvvapahiatggesfgvradntrllrvvnavleaippse
hrsliyrwglgssisldfahpaysareqqwmadhpvvkvavlnlfapftlfrtdeqfggi
saavlqllqlrtgldfeiigvdtveeliaklrsgeadmagalfvnsaresflsfsrpyvr
ngmvivtrqdpdapvdadhldgrtvalvrnsaaipllqrrypqakvvtadnpseamlmva
ngqadavvqtqisasyyvnryfagklriasaldlppaeialattrgqtelmsilnkalys
isndelasiisrwrgsdgdprtwyayrneiyle

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4q0cD (D:)
mqyklalngktlkgettteavdaataekvfkqyandngvdgewtyddatktftvtelvpr
gsaqasqeltlvgkaavpdvevaldgddwrwlarkrvltlgvyapdippfdvtygeryeg
ltadymaiiahnlgmqakvlryptreqalsalesgqidligtvngtdgrqqslrlsvpya
adhpvivmpigarhvpasnlagqrlavdinylpketlaraypqatlhyfpsseqalaava
ygqadvfigdalttshlvsqsyfndvrvvapahiatggesfgvradntrllrvvnavlea
ippsehrsliyrwglgssisldfahpaysareqqwmadhpvvkvavlnlfapftlfrtde
qfggisaavlqllqlrtgldfeiigvdtveeliaklrsgeadmagalfvnsaresflsfs
rpyvrngmvivtrqdpdapvdadhldgrtvalvrnsaaipllqrrypqakvvtadnpsea
mlmvangqadavvqtqisasyyvnryfagklriasaldlppaeialattrgqtelmsiln
kalysisndelasiisrwrgsdgdprtwyayrneiylehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4q0cD (D:)
sqeltlvgkaavpdvevaldgddwrwlarkrvltlgvyapdippfdvtygeryegltady
maiiahnlgmqakvlryptreqalsalesgqidligtvngtdgrqqslrlsvpyaadhpv
ivmpigarhvpasnlagqrlavdinylpketlaraypqatlhyfpsseqalaavaygqad
vfigdalttshlvsqsyfndvrvvapahiatggesfgvradntrllrvvnavleaippse
hrsliyrwglgssisldfahpaysareqqwmadhpvvkvavlnlfapftlfrtdeqfggi
saavlqllqlrtgldfeiigvdtveeliaklrsgeadmagalfvnsaresflsfsrpyvr
ngmvivtrqdpdapvdadhldgrtvalvrnsaaipllqrrypqakvvtadnpseamlmva
ngqadavvqtqisasyyvnryfagklriasaldlppaeialattrgqtelmsilnkalys
isndelasiisrwrgsdgdprtwyayrneiyle