PDB entry 4py5

View 4py5 on RCSB PDB site
Description: Thermovibrio ammonificans RNase H3 in complex with 19-mer RNA/DNA
Deposited on 2014-03-26, released 2014-07-30
The last revision was dated 2014-10-29, with a file datestamp of 2014-10-24.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.186
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ribonuclease
    Species: Thermovibrio ammonificans [TaxId:648996]
    Gene: Theam_0945
    Database cross-references and differences (RAF-indexed):
    • Uniprot E8T217 (1-End)
      • expression tag (0)
      • engineered mutation (78)
  • Chain 'B':
    Compound: 5'-r(*gp*ap*gp*up*gp*cp*gp*ap*cp*ap*cp*cp*up*gp*ap*up*up*cp*c)-3'
  • Chain 'C':
    Compound: 5'-d(*gp*gp*ap*ap*tp*cp*ap*gp*gp*tp*gp*tp*cp*gp*cp*ap*cp*tp*c)-3'
  • Heterogens: MG, SO4, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4py5A (A:)
smklsssekekllkklkalgakeekppehaqyrlrlndailtvyksgsvvyggkgreklk
elvaetvlsdtelprigcneagkgefvgplvvacivadekclkrlielgvkdskklsnek
veelaseitetchgkvkllipekynrayskfkninrlleavyreivsdlcekfspkvvvv
dkfsnraeevlkdvvkgarlevrpkaeddlavaaasivakavrlktmkelekrfkvklpe
gntglaellkktpkelheklfklhfsvggkk

    Sequence, based on observed residues (ATOM records):
    >4py5A (A:)
smklsssekekllkklkalgakeekppehaqyrlrlndailtvyksgsvvyggkgreklk
elvaetvlsdtelprigcneagkgefvgplvvacivadekclkrlielgvkdskklsnek
veelaseitetchgkvkllipekynrayskfkninrlleavyreivsdlcekfspkvvvv
dkfsnraeevlkdvvkgarlevrpkaeddlavaaasivakavrlktmkelekrfkvklpe
gntglaellkktpkelheklfklhfsv

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.