PDB entry 4prk

View 4prk on RCSB PDB site
Description: Crystal structure of D-lactate dehydrogenase (D-LDH) from Lactobacillus jensenii
Deposited on 2014-03-06, released 2014-06-18
The last revision was dated 2014-06-18, with a file datestamp of 2014-06-13.
Experiment type: XRAY
Resolution: 2.13 Å
R-factor: 0.231
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 4-phosphoerythronate dehydrogenase
    Species: Lactobacillus jensenii [TaxId:440497]
    Gene: pdxB, LBJG_01197
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 4-phosphoerythronate dehydrogenase
    Species: Lactobacillus jensenii [TaxId:440497]
    Gene: pdxB, LBJG_01197
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4prkA (A:)
mkiavfspseserklvaatekkfgcelklideslsaenvdqvadcdgvllkplgnlddei
vykkladygiksiglrivgtntidfdlakkyhltvtnvpvyspraiaemavtqamylnrk
igefkanmdkgdftnpdslisneiynktigligvghigsavaqifsamgakvlaydviyn
pevepyltyadfdtvlkeadiislhtpllkstenmigkkqfaemkndailinaargelvd
taaliealekheiaaagldtlahessyffkkvddaqipadykklaampnvivtphsayft
ktsvrnmieislrdtialangerahfvvsrhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4prkA (A:)
mkiavfspseserklvaatekkfgcelklideslsaenvdqvadcdgvllkplgnlddei
vykkladygiksiglrivgtntidfdlakkyhltvtnvpvyspraiaemavtqamylnrk
igefkanmdkgdftnpdslisneiynktigligvghigsavaqifsamgakvlaydviyn
pevepyltyadfdtvlkeadiislhtpllkstenmigkkqfaemkndailinaargelvd
taaliealekheiaaagldtlahessyffkkvddaqipadykklaampnvivtphsayft
ktsvrnmieislrdtialangerahfvvs

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4prkB (B:)
mkiavfspseserklvaatekkfgcelklideslsaenvdqvadcdgvllkplgnlddei
vykkladygiksiglrivgtntidfdlakkyhltvtnvpvyspraiaemavtqamylnrk
igefkanmdkgdftnpdslisneiynktigligvghigsavaqifsamgakvlaydviyn
pevepyltyadfdtvlkeadiislhtpllkstenmigkkqfaemkndailinaargelvd
taaliealekheiaaagldtlahessyffkkvddaqipadykklaampnvivtphsayft
ktsvrnmieislrdtialangerahfvvsrhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4prkB (B:)
mkiavfspseserklvaatekkfgcelklideslsaenvdqvadcdgvllkplgnlddei
vykkladygiksiglrivgtntidfdlakkyhltvtnvpvyspraiaemavtqamylnrk
igefkanmdkgdftnpdslisneiynktigligvghigsavaqifsamgakvlaydviyn
pevepyltyadfdtvlkeadiislhtpllkstenmigkkqfaemkndailinaargelvd
taaliealekheiaaagldtlahessyffkkvddaqipadykklaampnvivtphsayft
ktsvrnmieislrdtialangerahfvvs