PDB entry 4ppd

View 4ppd on RCSB PDB site
Description: PduA K26A, crystal form 2
Class: structural protein
Keywords: BMC shell protein, Pdu, propanediol, mutagenesis, carboxysome, STRUCTURAL PROTEIN
Deposited on 2014-02-26, released 2014-05-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-06-04, with a file datestamp of 2014-05-30.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.197
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Propanediol utilization protein pduA
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: pduA, STM2038
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A1C7 (Start-99)
      • engineered mutation (31)
    Domains in SCOPe 2.08: d4ppda_
  • Chain 'B':
    Compound: Propanediol utilization protein pduA
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: pduA, STM2038
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A1C7 (7-End)
      • expression tag (5-6)
      • engineered mutation (31)
    Domains in SCOPe 2.08: d4ppdb1, d4ppdb2
  • Chain 'C':
    Compound: Propanediol utilization protein pduA
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: pduA, STM2038
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A1C7
      • engineered mutation (31)
    Domains in SCOPe 2.08: d4ppdc_
  • Chain 'D':
    Compound: Propanediol utilization protein pduA
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: pduA, STM2038
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A1C7
      • engineered mutation (31)
    Domains in SCOPe 2.08: d4ppdd_
  • Chain 'E':
    Compound: Propanediol utilization protein pduA
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: pduA, STM2038
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A1C7
      • engineered mutation (31)
    Domains in SCOPe 2.08: d4ppde_
  • Chain 'F':
    Compound: Propanediol utilization protein pduA
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: pduA, STM2038
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A1C7
      • engineered mutation (31)
    Domains in SCOPe 2.08: d4ppdf_
  • Chain 'G':
    Compound: Propanediol utilization protein pduA
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: pduA, STM2038
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A1C7
      • engineered mutation (31)
    Domains in SCOPe 2.08: d4ppdg_
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ppdA (A:)
mhhhhhhqqealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgav
kaatdagaaaarnvgevkavhviprphtdvekilpkgisq

    Sequence, based on observed residues (ATOM records): (download) 
    >4ppdA (A:)
qealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgavkaatdaga
aaarnvgevkavhviprphtdvekilpkgisq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ppdB (B:)
mhhhhhhqqealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgav
kaatdagaaaarnvgevkavhviprphtdvekilpkgisq

    Sequence, based on observed residues (ATOM records): (download) 
    >4ppdB (B:)
hhqqealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgavkaatd
agaaaarnvgevkavhviprphtdvekilpk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4ppdC (C:)
mhhhhhhqqealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgav
kaatdagaaaarnvgevkavhviprphtdvekilpkgisq

    Sequence, based on observed residues (ATOM records): (download) 
    >4ppdC (C:)
ealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgavkaatdagaa
aarnvgevkavhviprphtilp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4ppdD (D:)
mhhhhhhqqealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgav
kaatdagaaaarnvgevkavhviprphtdvekilpkgisq

    Sequence, based on observed residues (ATOM records): (download) 
    >4ppdD (D:)
ealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgavkaatdagaa
aarnvgevkavhviprphtdvekilpk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4ppdE (E:)
mhhhhhhqqealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgav
kaatdagaaaarnvgevkavhviprphtdvekilpkgisq

    Sequence, based on observed residues (ATOM records): (download) 
    >4ppdE (E:)
ealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgavkaatdagaa
aarnvgevkavhviprdvekilpk

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4ppdF (F:)
mhhhhhhqqealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgav
kaatdagaaaarnvgevkavhviprphtdvekilpkgisq

    Sequence, based on observed residues (ATOM records): (download) 
    >4ppdF (F:)
algmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgavkaatdagaaa
arnvgevkavhviprphtdvekilpkgi

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4ppdG (G:)
mhhhhhhqqealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgav
kaatdagaaaarnvgevkavhviprphtdvekilpkgisq

    Sequence, based on observed residues (ATOM records): (download) 
    >4ppdG (G:)
ealgmvetkgltaaieaadamvasanvmlvgyekigsglvtvivrgdvgavkaatdagaa
aarnvgevkavhviprphtdvekilp