PDB entry 4plt

View 4plt on RCSB PDB site
Description: crystal structure of ancestral apicomplexan malate dehydrogenase with oxamate.
Deposited on 2014-05-19, released 2014-07-02
The last revision was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: malate dehydrogenase
    Species: Apicomplexa [TaxId:5794]
    Database cross-references and differences (RAF-indexed):
    • PDB 4PLT
  • Chain 'B':
    Compound: malate dehydrogenase
    Species: Apicomplexa [TaxId:5794]
    Database cross-references and differences (RAF-indexed):
    • PDB 4PLT
  • Chain 'C':
    Compound: malate dehydrogenase
    Species: Apicomplexa [TaxId:5794]
    Database cross-references and differences (RAF-indexed):
    • PDB 4PLT
  • Chain 'D':
    Compound: malate dehydrogenase
    Species: Apicomplexa [TaxId:5794]
    Database cross-references and differences (RAF-indexed):
    • PDB 4PLT
  • Heterogens: NAI, OXM, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4pltA (A:)
mtqrkkisligagniggtlahliaqkelgdvvlfdivegmpqgkaldishsspimgsnvk
itgtnnyedikgsdvviitagiprkpgksdkewsrddllsvnakimkdvaenikkycpna
fvivvtnpldvmvyvlhkysglphnkvcgmagvldssrfryflaeklnvspndvqamvig
ghgdtmvpltryctvggipltefikqgwitqeeideivertrnaggeivnllktgsayfa
paasaiemaesylkdkkrilpcsaylegqygvkdlfvgvpviigkngvekiielelteee
qemfdksvesvrelvetvkklnalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4pltA (A:)
tqrkkisligagniggtlahliaqkelgdvvlfdivegmpqgkaldishsspimgsnvki
tgtnnyedikgsdvviitagiprkpgksdkewsrddllsvnakimkdvaenikkycpnaf
vivvtnpldvmvyvlhkysglphnkvcgmagvldssrfryflaeklnvspndvqamvigg
hgdtmvpltryctvggipltefikqgwitqeeideivertrnaggeivnllktgsayfap
aasaiemaesylkdkkrilpcsaylegqygvkdlfvgvpviigkngvekiielelteeeq
emfdksvesvrelvetvkk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4pltB (B:)
mtqrkkisligagniggtlahliaqkelgdvvlfdivegmpqgkaldishsspimgsnvk
itgtnnyedikgsdvviitagiprkpgksdkewsrddllsvnakimkdvaenikkycpna
fvivvtnpldvmvyvlhkysglphnkvcgmagvldssrfryflaeklnvspndvqamvig
ghgdtmvpltryctvggipltefikqgwitqeeideivertrnaggeivnllktgsayfa
paasaiemaesylkdkkrilpcsaylegqygvkdlfvgvpviigkngvekiielelteee
qemfdksvesvrelvetvkklnalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4pltB (B:)
tqrkkisligagniggtlahliaqkelgdvvlfdivegmpqgkaldishsspimgsnvki
tgtnnyedikgsdvviitagiprkpgksdkewsrddllsvnakimkdvaenikkycpnaf
vivvtnpldvmvyvlhkysglphnkvcgmagvldssrfryflaeklnvspndvqamvigg
hgdtmvpltryctvggipltefikqgwitqeeideivertrnaggeivnllktgsayfap
aasaiemaesylkdkkrilpcsaylegqygvkdlfvgvpviigkngvekiielelteeeq
emfdksvesvrelvetvkk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4pltC (C:)
mtqrkkisligagniggtlahliaqkelgdvvlfdivegmpqgkaldishsspimgsnvk
itgtnnyedikgsdvviitagiprkpgksdkewsrddllsvnakimkdvaenikkycpna
fvivvtnpldvmvyvlhkysglphnkvcgmagvldssrfryflaeklnvspndvqamvig
ghgdtmvpltryctvggipltefikqgwitqeeideivertrnaggeivnllktgsayfa
paasaiemaesylkdkkrilpcsaylegqygvkdlfvgvpviigkngvekiielelteee
qemfdksvesvrelvetvkklnalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4pltC (C:)
qrkkisligagniggtlahliaqkelgdvvlfdivegmpqgkaldishsspimgsnvkit
gtnnyedikgsdvviitagiprkpgksdkewsrddllsvnakimkdvaenikkycpnafv
ivvtnpldvmvyvlhkysglphnkvcgmagvldssrfryflaeklnvspndvqamviggh
gdtmvpltryctvggipltefikqgwitqeeideivertrnaggeivnllktgsayfapa
asaiemaesylkdkkrilpcsaylegqygvkdlfvgvpviigkngvekiielelteeeqe
mfdksvesvrelvetvkk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4pltD (D:)
mtqrkkisligagniggtlahliaqkelgdvvlfdivegmpqgkaldishsspimgsnvk
itgtnnyedikgsdvviitagiprkpgksdkewsrddllsvnakimkdvaenikkycpna
fvivvtnpldvmvyvlhkysglphnkvcgmagvldssrfryflaeklnvspndvqamvig
ghgdtmvpltryctvggipltefikqgwitqeeideivertrnaggeivnllktgsayfa
paasaiemaesylkdkkrilpcsaylegqygvkdlfvgvpviigkngvekiielelteee
qemfdksvesvrelvetvkklnalehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4pltD (D:)
qrkkisligagniggtlahliaqkelgdvvlfdivegmpqgkaldishsspimgsnvkit
gtnnyedikgsdvviitagiprkpgksdkewsrddllsvnakimkdvaenikkycpnafv
ivvtnpldvmvyvlhkysglphnkvcgmagvldssrfryflaeklnvspndvqamviggh
gdtmvpltryctvggipltefikqgwitqeeideivertrnaggeivnllktgsayfapa
asaiemaesylkdkkrilpcsaylegqygvkdlfvgvpviigkngvekiielelteeeqe
mfdksvesvrelvetvkk