PDB entry 4ph3

View 4ph3 on RCSB PDB site
Description: N-terminal domain of the capsid protein from bovine leukaemia virus (with no beta-hairpin)
Class: viral protein
Keywords: retroviral capsid NTD with no beta-hairpin, all alpha, VIRAL PROTEIN
Deposited on 2014-05-03, released 2015-06-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-15, with a file datestamp of 2020-01-10.
Experiment type: XRAY
Resolution: 2.44 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: BLV capsid
    Species: Bovine leukemia virus [TaxId:11901]
    Gene: gag-pro-pol
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ph3a_
  • Chain 'B':
    Compound: BLV capsid
    Species: Bovine leukemia virus [TaxId:11901]
    Gene: gag-pro-pol
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ph3b_
  • Heterogens: IOD, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ph3A (A:)
lpiisegnrnrhrawalrelqdikkeienkapgsqvwiqtlrlailqadptpadleqlcq
yiaspvdqtahmtsltaaiaaaeaantlqgfnpqngtltqqsaqpnagdlrsqyqnlwlq
awknlptrp

    Sequence, based on observed residues (ATOM records): (download) 
    >4ph3A (A:)
rawalrelqdikkeienkapgsqvwiqtlrlailqadptpadleqlcqyiaspvdqtahm
tsltaaiaaaeaantlqgfnpqngtltqqsaqpnagdlrsqyqnlwlqawknlpt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ph3B (B:)
lpiisegnrnrhrawalrelqdikkeienkapgsqvwiqtlrlailqadptpadleqlcq
yiaspvdqtahmtsltaaiaaaeaantlqgfnpqngtltqqsaqpnagdlrsqyqnlwlq
awknlptrp

    Sequence, based on observed residues (ATOM records): (download) 
    >4ph3B (B:)
hrawalrelqdikkeienkapgsqvwiqtlrlailqadptpadleqlcqyiaspvdqtah
mtsltaaiaaaeaantlqgfnpqngtltqqsaqpnagdlrsqyqnlwlqawknlp