PDB entry 4pgh

View 4pgh on RCSB PDB site
Description: Caffeic acid O-methyltransferase from Sorghum bicolor
Class: transferase
Keywords: SAM-dependent O-methyltransferase
Deposited on 2014-05-02, released 2014-07-02
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-10-01, with a file datestamp of 2014-09-26.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.206
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Caffeic acid O-methyltransferase
    Species: SORGHUM BICOLOR [TaxId:4558]
    Gene: Sb07g003860, SORBIDRAFT_07g003860
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4pgha1, d4pgha2
  • Chain 'B':
    Compound: Caffeic acid O-methyltransferase
    Species: SORGHUM BICOLOR [TaxId:4558]
    Gene: Sb07g003860, SORBIDRAFT_07g003860
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4pghb1, d4pghb2
  • Chain 'C':
    Compound: Caffeic acid O-methyltransferase
    Species: SORGHUM BICOLOR [TaxId:4558]
    Gene: Sb07g003860, SORBIDRAFT_07g003860
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4pghc1, d4pghc2
  • Chain 'D':
    Compound: Caffeic acid O-methyltransferase
    Species: SORGHUM BICOLOR [TaxId:4558]
    Gene: Sb07g003860, SORBIDRAFT_07g003860
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4pghd1, d4pghd2
  • Heterogens: SAM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4pghA (A:)
aedvaavadeeacmyamqlasssilpmtlknalelgllevlqkdagkalaaeevvarlpv
aptnpaaadmvdrmlrllasydvvkcqmedkdgkyerrysaapvgkwltpnedgvsmaal
almnqdkvlmeswyylkdavldggipfnkaygmtafeyhgtdprfnrvfnegmknhsvii
tkkllefytgfdesvstlvdvgggigatlhaitshhshirgvnfdlphviseappfpgvq
hvggdmfksvpagdailmkwilhdwsdahcatllkncydalpekggkvivvecvlpvttd
avpkaqgvfhvdmimlahnpggreryerefrdlakaagfsgfkatyiyanawaiefik

    Sequence, based on observed residues (ATOM records): (download) 
    >4pghA (A:)
aavadeeacmyamqlasssilpmtlknalelgllevlqkdagkalaaeevvarlpvaptn
paaadmvdrmlrllasydvvkcqmedkdgkyerrysaapvgkwltpnedgvsmaalalmn
qdkvlmeswyylkdavldggipfnkaygmtafeyhgtdprfnrvfnegmknhsviitkkl
lefytgfdesvstlvdvgggigatlhaitshhshirgvnfdlphviseappfpgvqhvgg
dmfksvpagdailmkwilhdwsdahcatllkncydalpekggkvivvecvlpvttdavpk
aqgvfhvdmimlahnpggreryerefrdlakaagfsgfkatyiyanawaiefik

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4pghB (B:)
aedvaavadeeacmyamqlasssilpmtlknalelgllevlqkdagkalaaeevvarlpv
aptnpaaadmvdrmlrllasydvvkcqmedkdgkyerrysaapvgkwltpnedgvsmaal
almnqdkvlmeswyylkdavldggipfnkaygmtafeyhgtdprfnrvfnegmknhsvii
tkkllefytgfdesvstlvdvgggigatlhaitshhshirgvnfdlphviseappfpgvq
hvggdmfksvpagdailmkwilhdwsdahcatllkncydalpekggkvivvecvlpvttd
avpkaqgvfhvdmimlahnpggreryerefrdlakaagfsgfkatyiyanawaiefik

    Sequence, based on observed residues (ATOM records): (download) 
    >4pghB (B:)
edvaavadeeacmyamqlasssilpmtlknalelgllevlqkdagkalaaeevvarlpva
ptnpaaadmvdrmlrllasydvvkcqmedkdgkyerrysaapvgkwltpnedgvsmaala
lmnqdkvlmeswyylkdavldggipfnkaygmtafeyhgtdprfnrvfnegmknhsviit
kkllefytgfdesvstlvdvgggigatlhaitshhshirgvnfdlphviseappfpgvqh
vggdmfksvpagdailmkwilhdwsdahcatllkncydalpekggkvivvecvlpvttda
vpkaqgvfhvdmimlahnpggreryerefrdlakaagfsgfkatyiyanawaiefik

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4pghC (C:)
aedvaavadeeacmyamqlasssilpmtlknalelgllevlqkdagkalaaeevvarlpv
aptnpaaadmvdrmlrllasydvvkcqmedkdgkyerrysaapvgkwltpnedgvsmaal
almnqdkvlmeswyylkdavldggipfnkaygmtafeyhgtdprfnrvfnegmknhsvii
tkkllefytgfdesvstlvdvgggigatlhaitshhshirgvnfdlphviseappfpgvq
hvggdmfksvpagdailmkwilhdwsdahcatllkncydalpekggkvivvecvlpvttd
avpkaqgvfhvdmimlahnpggreryerefrdlakaagfsgfkatyiyanawaiefik

    Sequence, based on observed residues (ATOM records): (download) 
    >4pghC (C:)
avadeeacmyamqlasssilpmtlknalelgllevlqkdagkalaaeevvarlpvaptnp
aaadmvdrmlrllasydvvkcqmedkdgkyerrysaapvgkwltpnedgvsmaalalmnq
dkvlmeswyylkdavldggipfnkaygmtafeyhgtdprfnrvfnegmknhsviitkkll
efytgfdesvstlvdvgggigatlhaitshhshirgvnfdlphviseappfpgvqhvggd
mfksvpagdailmkwilhdwsdahcatllkncydalpekggkvivvecvlpvttdavpka
qgvfhvdmimlahnpggreryerefrdlakaagfsgfkatyiyanawaiefik

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4pghD (D:)
aedvaavadeeacmyamqlasssilpmtlknalelgllevlqkdagkalaaeevvarlpv
aptnpaaadmvdrmlrllasydvvkcqmedkdgkyerrysaapvgkwltpnedgvsmaal
almnqdkvlmeswyylkdavldggipfnkaygmtafeyhgtdprfnrvfnegmknhsvii
tkkllefytgfdesvstlvdvgggigatlhaitshhshirgvnfdlphviseappfpgvq
hvggdmfksvpagdailmkwilhdwsdahcatllkncydalpekggkvivvecvlpvttd
avpkaqgvfhvdmimlahnpggreryerefrdlakaagfsgfkatyiyanawaiefik