PDB entry 4pfr

View 4pfr on RCSB PDB site
Description: crystal structure of a trap periplasmic solute binding protein from rhodobacter sphaeroides (rsph17029_3541, target efi-510203), apo open partially disordered
Deposited on 2014-04-30, released 2014-05-14
The last revision was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TRAP dicarboxylate transporter, DctP subunit
    Species: Rhodobacter sphaeroides [TaxId:349101]
    Gene: Rsph17029_3541
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: TRAP dicarboxylate transporter, DctP subunit
    Species: Rhodobacter sphaeroides [TaxId:349101]
    Gene: Rsph17029_3541
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MLT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4pfrA (A:)
mhhhhhhssgvdlgtenlyfqsmqdytirlshgdnesnpthltavkfqelvkeytegkae
vqifpsnslgtetevaqalrmgsieaeilytgnlvplapsagvlmlpyaytsteqahkam
dalidplnerltkeagvralglmekgfrvlttnkpvttledlkglkirvspndiaiktfr
awgieplpmdwaevfpalqqrvidgqenpyttaissrffevqsditeihymmwtgpllis
erafqkypediqqallragreavdygrqvsaelteqskaelvkndmtlhgapkdeekwea
aaaalwpefydqiggeewatqaieiikatek

    Sequence, based on observed residues (ATOM records):
    >4pfrA (A:)
dytirlshgdnesnpthltavkfqelvkeytegkaevqifpsnslgtetevaqalrmgsi
eaeilytgnlvplapsagvlmlpyaytsteqahkamdalidplnerltkeagvralglme
kgfrvlttnkpvttledlkglkirvspndiaiktfrawgieplpmdwaevfpalqqrvid
gqenpyttaissrffevqsditeihymmwtgplliserafqkypediqqallragreavd
ygrqvsaelteqskaelvkndmtlhgapkdeekweaaaaalwpefydqiggeewatqaie
iikate

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4pfrB (B:)
mhhhhhhssgvdlgtenlyfqsmqdytirlshgdnesnpthltavkfqelvkeytegkae
vqifpsnslgtetevaqalrmgsieaeilytgnlvplapsagvlmlpyaytsteqahkam
dalidplnerltkeagvralglmekgfrvlttnkpvttledlkglkirvspndiaiktfr
awgieplpmdwaevfpalqqrvidgqenpyttaissrffevqsditeihymmwtgpllis
erafqkypediqqallragreavdygrqvsaelteqskaelvkndmtlhgapkdeekwea
aaaalwpefydqiggeewatqaieiikatek

    Sequence, based on observed residues (ATOM records):
    >4pfrB (B:)
ieaeilytgnlvplapsagvlmlpyaytsteqahkamdalidplnerltkeagvralglm
ekgfrvlttnkpvttledlkglkirvspndiaiktfrawgieplpmdwaevfpalqqrvi
dgqenpyttaissrffevqsditeihymmwtgpllragreavdygrqvsaelteqskael
vkndmtlhgapkdeekweaaaaalwpefydqiggeewatqaieiikate