PDB entry 4peh

View 4peh on RCSB PDB site
Description: dbr1 in complex with synthetic linear rna
Deposited on 2014-04-23, released 2014-08-27
The last revision was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA lariat debranching enzyme, putative
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_062730
    Database cross-references and differences (RAF-indexed):
    • Uniprot C4M1P9
      • engineered mutation (15)
  • Chain 'B':
    Compound: RNA lariat debranching enzyme, putative
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_062730
    Database cross-references and differences (RAF-indexed):
    • Uniprot C4M1P9
      • engineered mutation (15)
  • Chain 'C':
    Compound: RNA lariat debranching enzyme, putative
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_062730
    Database cross-references and differences (RAF-indexed):
    • Uniprot C4M1P9
      • engineered mutation (15)
  • Chain 'D':
    Compound: RNA lariat debranching enzyme, putative
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_062730
    Database cross-references and differences (RAF-indexed):
    • Uniprot C4M1P9
      • engineered mutation (15)
  • Chain 'E':
    Compound: RNA lariat debranching enzyme, putative
    Species: Entamoeba histolytica [TaxId:5759]
    Gene: EHI_062730
    Database cross-references and differences (RAF-indexed):
    • Uniprot C4M1P9
      • engineered mutation (15)
  • Chain 'V':
    Compound: RNA (5'-r(*cp*up*ap*(a2p)p*ap*cp*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'W':
    Compound: RNA (5'-r(*cp*up*ap*(a2p)p*ap*cp*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'X':
    Compound: RNA (5'-r(*cp*up*ap*(a2p)p*ap*cp*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'Y':
    Compound: RNA (5'-r(*cp*up*ap*(a2p)p*ap*cp*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'Z':
    Compound: RNA (5'-r(*cp*up*ap*(a2p)p*ap*cp*ap*a)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: MN, SO4, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4pehA (A:)
gamateqiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvyl
kvppkykqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsc
ininglrivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidisl
shdwpqgivmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhae
egpthfialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsys
isellskrtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelnin

    Sequence, based on observed residues (ATOM records):
    >4pehA (A:)
qiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvylkvppky
kqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsciningl
rivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidislshdwpq
givmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhaeegpthf
ialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsysisells
krtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelni

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4pehB (B:)
gamateqiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvyl
kvppkykqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsc
ininglrivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidisl
shdwpqgivmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhae
egpthfialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsys
isellskrtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelnin

    Sequence, based on observed residues (ATOM records):
    >4pehB (B:)
qiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvylkvppky
kqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsciningl
rivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidislshdwpq
givmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhaeegpthf
ialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsysisells
krtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelni

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4pehC (C:)
gamateqiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvyl
kvppkykqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsc
ininglrivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidisl
shdwpqgivmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhae
egpthfialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsys
isellskrtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelnin

    Sequence, based on observed residues (ATOM records):
    >4pehC (C:)
qiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvylkvppky
kqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsciningl
rivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidislshdwpq
givmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhaeegpthf
ialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsysisells
krtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelni

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4pehD (D:)
gamateqiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvyl
kvppkykqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsc
ininglrivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidisl
shdwpqgivmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhae
egpthfialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsys
isellskrtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelnin

    Sequence, based on observed residues (ATOM records):
    >4pehD (D:)
qiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvylkvppky
kqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsciningl
rivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidislshdwpq
givmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhaeegpthf
ialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsysisells
krtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelni

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4pehE (E:)
gamateqiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvyl
kvppkykqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsc
ininglrivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidisl
shdwpqgivmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhae
egpthfialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsys
isellskrtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelnin

    Sequence, based on observed residues (ATOM records):
    >4pehE (E:)
qiqhiaivgsvhgkyremyrqlseyekstgkeisfvictgdmqtlryeadlvylkvppky
kqmgdfhlyyegkekapyltlfiggnhessnvllhlynggfvcfnmyylgvcsciningl
rivgvsgiyksfdekkpytyppspndvvslfhtrnyviqmlsnlsqssqidislshdwpq
givmkgnykqlyrfqpgfkkdgaslgspinkvilntlkpkywisghmhceyhaeegpthf
ialgkigyknaisyldlplkqktdleydkdwvcnlimtwpafsnkaqfpdlsysisells
krtkeldkkiielwekyiglkiiydsdtfdiqftsrrfyiekiynelni

  • Chain 'V':
    No sequence available.

  • Chain 'W':
    No sequence available.

  • Chain 'X':
    No sequence available.

  • Chain 'Y':
    No sequence available.

  • Chain 'Z':
    No sequence available.