PDB entry 4pak

View 4pak on RCSB PDB site
Description: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM VERMINEPHROBACTER EISENIAE EF01-2 (Veis_3954, TARGET EFI-510324) A NEPHRIDIAL SYMBIONT OF THE EARTHWORM EISENIA FOETIDA, BOUND TO (R)-PANTOIC ACID
Class: solute-binding protein
Keywords: TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, EFI, Structural Genomics, SOLUTE-BINDING PROTEIN
Deposited on 2014-04-09, released 2014-05-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-02-25, with a file datestamp of 2015-02-20.
Experiment type: XRAY
Resolution: 1.2 Å
R-factor: 0.154
AEROSPACI score: 0.75 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TRAP dicarboxylate transporter, DctP subunit
    Species: Verminephrobacter eiseniae [TaxId:391735]
    Gene: Veis_3954
    Database cross-references and differences (RAF-indexed):
    • Uniprot A1WPV4 (23-325)
      • expression tag (22)
    Domains in SCOPe 2.08: d4paka1, d4paka2
  • Heterogens: SO4, PAF, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4pakA (A:)
mhhhhhhssgvdlgtenlyfqsmaaqttmrinistaqnshqgvaidtfakevekrtggry
kvqtfynaalgaeresveavqlgtheltfsssgpipnfvpetkildvpflfrdkaharav
ldgpigqelltrfdgkgfkalawaengfrhmsnskravkepgdlkglkmrtmenpvhiaa
ykgfgivttpmafsevftalqqgtvdgqenplsviisakfdqvqkhltltghvyspalfl
mnkalfdklpaadqqafidaarqgaklnrarvdeddakgvadlrakgmtvidnidkarfv
aalapvnaqfekqfgkaaleqirsaq

    Sequence, based on observed residues (ATOM records): (download) 
    >4pakA (A:)
maaqttmrinistaqnshqgvaidtfakevekrtggrykvqtfynaalgaeresveavql
gtheltfsssgpipnfvpetkildvpflfrdkaharavldgpigqelltrfdgkgfkala
waengfrhmsnskravkepgdlkglkmrtmenpvhiaaykgfgivttpmafsevftalqq
gtvdgqenplsviisakfdqvqkhltltghvyspalflmnkalfdklpaadqqafidaar
qgaklnrarvdeddakgvadlrakgmtvidnidkarfvaalapvnaqfekqfgkaaleqi
rsaq