PDB entry 4p6p

View 4p6p on RCSB PDB site
Description: Structure of ribB complexed with inhibitor (4PEH) and metal ions
Class: lyase/lyase inhibitor
Keywords: ribB, riboflvain, ligand, complex, crystal, LYASE-LYASE INHIBITOR complex
Deposited on 2014-03-25, released 2015-03-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 1.86 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3,4-dihydroxy-2-butanone 4-phosphate synthase
    Species: Vibrio cholerae serotype O1 [TaxId:243277]
    Gene: ribB, VC_A1060
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4p6pa_
  • Chain 'B':
    Compound: 3,4-dihydroxy-2-butanone 4-phosphate synthase
    Species: Vibrio cholerae serotype O1 [TaxId:243277]
    Gene: ribB, VC_A1060
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KKP2 (19-End)
      • expression tag (17-18)
    Domains in SCOPe 2.07: d4p6pb1, d4p6pb2
  • Heterogens: RES, ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4p6pA (A:)
    mgshhhhhhssglvprgshmnqssllaefgdpitrvenalqalregrgvlllddedrene
    gdiiyaveslttaqmalmirecsgivclclteaqadrlalppmvvnnnsanqtaftvsie
    akhgvttgvsaqdrvttiktaanpqakpedlarpghvfplraraggvlarrghtegtvdl
    mqmaglqpagvlceltnpdgsmaktpeiiefgklhnmpvltiedmvqyriqfdlkla
    

    Sequence, based on observed residues (ATOM records): (download)
    >4p6pA (A:)
    nqssllaefgdpitrvenalqalregrgvlllddedrenegdiiyaveslttaqmalmir
    ecsgivclclteaqadrlalppmvvnnnsanqtaftvsieakhgvttgvsaqdrvttikt
    aanpqakpedlarpghvfplraraggvlarrghtegtvdlmqmaglqpagvlceltnpdg
    smaktpeiiefgklhnmpvltiedmvqyriqfdlkl
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4p6pB (B:)
    mgshhhhhhssglvprgshmnqssllaefgdpitrvenalqalregrgvlllddedrene
    gdiiyaveslttaqmalmirecsgivclclteaqadrlalppmvvnnnsanqtaftvsie
    akhgvttgvsaqdrvttiktaanpqakpedlarpghvfplraraggvlarrghtegtvdl
    mqmaglqpagvlceltnpdgsmaktpeiiefgklhnmpvltiedmvqyriqfdlkla
    

    Sequence, based on observed residues (ATOM records): (download)
    >4p6pB (B:)
    shmnqssllaefgdpitrvenalqalregrgvlllddedrenegdiiyaveslttaqmal
    mirecsgivclclteaqadrlalppmvvnnnsanqtaftvsieakhgvttgvsaqdrvtt
    iktaanpqakpedlarpghvfplraraggvlarrghtegtvdlmqmaglqpagvlceltn
    pdgsmaktpeiiefgklhnmpvltiedmvqyriqfdlk