PDB entry 4p5d

View 4p5d on RCSB PDB site
Description: crystal structure of rat dnph1 (rcl) with 6-naphthyl-purine-riboside-monophosphate
Deposited on 2014-03-16, released 2014-08-20
The last revision was dated 2014-08-20, with a file datestamp of 2014-08-15.
Experiment type: XRAY
Resolution: 2.11 Å
R-factor: 0.176
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Dnph1, Rcl
    Database cross-references and differences (RAF-indexed):
    • Uniprot O35820 (3-143)
      • expression tag (1-2)
      • engineered mutation (61)
      • expression tag (144)
  • Chain 'C':
    Compound: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Dnph1, Rcl
    Database cross-references and differences (RAF-indexed):
    • Uniprot O35820 (3-143)
      • expression tag (2)
      • engineered mutation (61)
  • Heterogens: N6P, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4p5dA (A:)
mrrsvyfcgsirggredqalyarivsrlrrygkvltehvadaeleplgeeaaggdqfihe
qnlnwlqqadvvvaevtqpslgvgyelgravalgkpilclfrpqsgrvlsamirgaadgs
rfqvwdyaegevetmldryfeaylvehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4p5dA (A:)
rrsvyfcgsirggredqalyarivsrlrrygkvltehvadaeleplgeeaaggdqfiheq
nlnwlqqadvvvaevtqpslgvgyelgravalgkpilclfrpqsgrvlsamirgaadgsr
fqvwdyaegevetmldryfeaylv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4p5dC (C:)
mrrsvyfcgsirggredqalyarivsrlrrygkvltehvadaeleplgeeaaggdqfihe
qnlnwlqqadvvvaevtqpslgvgyelgravalgkpilclfrpqsgrvlsamirgaadgs
rfqvwdyaegevetmldryfeaylvehhhhhh

    Sequence, based on observed residues (ATOM records):
    >4p5dC (C:)
rsvyfcgsirggredqalyarivsrlrrygkvltehvadaeleplgeeaaggdqfiheqn
lnwlqqadvvvaevtqpslgvgyelgravalgkpilclfrpqsgrvlsamirgaadgsrf
qvwdyaegevetmldryfeayl