PDB entry 4ozg

View 4ozg on RCSB PDB site
Description: D2 protein complex
Class: immune system
Keywords: immune receptor-ligand complex, immune system
Deposited on 2014-02-16, released 2014-04-16
The last revision prior to the SCOPe 2.07 freeze date was dated 2015-04-22, with a file datestamp of 2015-04-17.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HLA class II histocompatibility antigen, DQ alpha 1 chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-DQA1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4ozga1, d4ozga2
  • Chain 'B':
    Compound: HLA class II histocompatibility antigen, DQ beta 1 chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-DQB1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4ozgb1, d4ozgb2
  • Chain 'C':
    Compound: HLA class II histocompatibility antigen, DQ alpha 1 chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-DQA1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4ozgc1, d4ozgc2
  • Chain 'D':
    Compound: HLA class II histocompatibility antigen, DQ beta 1 chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-DQB1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4ozgd1, d4ozgd2
  • Chain 'E':
    Compound: T-cell receptor, d2, alpha chain
    Species: Homo sapiens [TaxId:9606]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZG (0-End)
    Domains in SCOPe 2.07: d4ozge1, d4ozge2
  • Chain 'F':
    Compound: T-cell receptor, d2, beta chain
    Species: Homo sapiens [TaxId:9606]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZG
    Domains in SCOPe 2.07: d4ozgf1, d4ozgf2
  • Chain 'G':
    Compound: T-cell receptor, d2, alpha chain
    Species: Homo sapiens [TaxId:9606]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZG (0-End)
    Domains in SCOPe 2.07: d4ozgg1, d4ozgg2
  • Chain 'H':
    Compound: T-cell receptor, d2, beta chain
    Species: Homo sapiens [TaxId:9606]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZG
    Domains in SCOPe 2.07: d4ozgh1, d4ozgh2
  • Chain 'I':
    Compound: deamidated Gliadin-alpha2 peptide
    Species: Triticum aestivum [TaxId:4565]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZG (0-12)
  • Chain 'J':
    Compound: deamidated Gliadin-alpha2 peptide
    Species: Triticum aestivum [TaxId:4565]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZG (0-End)
  • Heterogens: NAG, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4ozgA (A:)
    edivadhvasygvnlyqsygpsgqythefdgdeqfyvdlgrketvwclpvlrqfrfdpqf
    altniavlkhnlnslikrsnstaatnevpevtvfskspvtlgqpniliclvdnifppvvn
    itwlsnghsvtegvsetsflsksdhsffkisyltllpsaeesydckvehwgldkpllkhw
    epetsgddddk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ozgA (A:)
    ivadhvasygvnlyqsygpsgqythefdgdeqfyvdlgrketvwclpvlrqfrfdpqfal
    tniavlkhnlnslikrsnstaatnevpevtvfskspvtlgqpniliclvdnifppvvnit
    wlsnghsvtegvsetsflsksdhsffkisyltllpsaeesydckvehwgldkpllkhwep
    e
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4ozgB (B:)
    ggsiegrggsgasrdspedfvyqfkgmcyftngtervrlvsrsiynreeivrfdsdvgef
    ravtllglpaaeywnsqkdilerkraavdrvcrhnyqlelrttlqrrveptvtispsrte
    alnhhnllvcsvtdfypaqikvrwfrndqeetagvvstplirngdwtfqilvmlemtpqr
    gdvytchvehpslqspitvewraqstggddddk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ozgB (B:)
    spedfvyqfkgmcyftngtervrlvsrsiynreeivrfdsdvgefravtllglpaaeywn
    sqkdilerkraavdrvcrhnyqlelrttlqrrveptvtispshnllvcsvtdfypaqikv
    rwfrndqeetagvvstplirngdwtfqilvmlemtpqrgdvytchvehpslqspitvewr
    a
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4ozgC (C:)
    edivadhvasygvnlyqsygpsgqythefdgdeqfyvdlgrketvwclpvlrqfrfdpqf
    altniavlkhnlnslikrsnstaatnevpevtvfskspvtlgqpniliclvdnifppvvn
    itwlsnghsvtegvsetsflsksdhsffkisyltllpsaeesydckvehwgldkpllkhw
    epetsgddddk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ozgC (C:)
    ivadhvasygvnlyqsygpsgqythefdgdeqfyvdlgrketvwclpvlrqfrfdpqfal
    tniavlkhnlnslikrsnstaatnevpevtvfskspvtlgqpniliclvdnifppvvnit
    wlsnghsvtegvsetsflsksdhsffkisyltllpsaeesydckvehwgldkpllkhwep
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4ozgD (D:)
    ggsiegrggsgasrdspedfvyqfkgmcyftngtervrlvsrsiynreeivrfdsdvgef
    ravtllglpaaeywnsqkdilerkraavdrvcrhnyqlelrttlqrrveptvtispsrte
    alnhhnllvcsvtdfypaqikvrwfrndqeetagvvstplirngdwtfqilvmlemtpqr
    gdvytchvehpslqspitvewraqstggddddk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ozgD (D:)
    spedfvyqfkgmcyftngtervrlvsrsiynreeivrfdsdvgefravtllglpaaeywn
    sqkdilerkraavdrvcrhnyqlelrttlqrrveptvtispsnllvcsvtdfypaqikvr
    wfrndqeetagvvstplirngdwtfqilvmlemtpqrgdvytchvehpslqspitvewra
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4ozgE (E:)
    mkttqppsmdcaegraanlpcnhstisgneyvywyrqihsqgpqyiihglknnetnemas
    liitedrksstlilphatlrdtavyycivlggadgltfgkgthliiqpyiqnpdpavyql
    rdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfa
    canafnnsiipedtffpspess
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ozgE (E:)
    mkttqppsmdcaegraanlpcnhstisgneyvywyrqihsqgpqyiihglknnetnemas
    liitedrksstlilphatlrdtavyycivlggadgltfgkgthliiqpyiqnpdpavyql
    rdsdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfacan
    afnnsiipedtffp
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4ozgF (F:)
    mgvsqspsnkvtekgkdvelrcdpisghtalywyrqslgqglefliyfqgnsapdksglp
    sdrfsaertggsvstltiqrtqqedsavylcassfrftdtqyfgpgtrltvledlknvfp
    pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpa
    lndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr
    ad
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ozgF (F:)
    gvsqspsnkvtekgkdvelrcdpisghtalywyrqslgqglefliyfqgnsapdksglps
    drfsaertggsvstltiqrtqqedsavylcassfrftdtqyfgpgtrltvledlknvfpp
    evavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpal
    ndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4ozgG (G:)
    mkttqppsmdcaegraanlpcnhstisgneyvywyrqihsqgpqyiihglknnetnemas
    liitedrksstlilphatlrdtavyycivlggadgltfgkgthliiqpyiqnpdpavyql
    rdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfa
    canafnnsiipedtffpspess
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ozgG (G:)
    mkttqppsmdcaegraanlpcnhstisgneyvywyrqihsqgpqyiihglknnetnemas
    liitedrksstlilphatlrdtavyycivlggadgltfgkgthliiqpyiqnpdpavyql
    rdsdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfacan
    afnnsiipedtffp
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >4ozgH (H:)
    mgvsqspsnkvtekgkdvelrcdpisghtalywyrqslgqglefliyfqgnsapdksglp
    sdrfsaertggsvstltiqrtqqedsavylcassfrftdtqyfgpgtrltvledlknvfp
    pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpa
    lndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr
    ad
    

    Sequence, based on observed residues (ATOM records): (download)
    >4ozgH (H:)
    gvsqspsnkvtekgkdvelrcdpisghtalywyrqslgqglefliyfqgnsapdksglps
    drfsaertggsvstltiqrtqqedsavylcassfrftdtqyfgpgtrltvledlknvfpp
    evavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpal
    ndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra
    

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    No sequence available.