PDB entry 4osh
View 4osh on RCSB PDB site
Description: Crystal structure of the TAL effector dHax3 with NI RVD at 2.2 angstrom resolution
Class: DNA binding protein/DNA
Keywords: DNA binding protein, DNA, DNA binding protein-DNA complex
Deposited on
2014-02-13, released
2014-05-28
The last revision prior to the SCOPe 2.06 freeze date was dated
2014-05-28, with a file datestamp of
2014-05-23.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.207
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hax3
Species: Xanthomonas campestris pv. armoraciae [TaxId:329463]
Gene: hax3
Database cross-references and differences (RAF-indexed):
- Uniprot Q3ZD72
- engineered mutation (70-71)
- engineered mutation (138-139)
- engineered mutation (172-173)
- engineered mutation (206-207)
- engineered mutation (240-241)
- engineered mutation (275)
- engineered mutation (309)
- engineered mutation (342-343)
- engineered mutation (376-377)
- engineered mutation (410-411)
Domains in SCOPe 2.06: d4osha_ - Chain 'B':
Compound: Hax3
Species: Xanthomonas campestris pv. armoraciae [TaxId:329463]
Gene: hax3
Database cross-references and differences (RAF-indexed):
- Uniprot Q3ZD72 (Start-490)
- engineered mutation (70-71)
- engineered mutation (138-139)
- engineered mutation (172-173)
- engineered mutation (206-207)
- engineered mutation (240-241)
- engineered mutation (275)
- engineered mutation (309)
- engineered mutation (342-343)
- engineered mutation (376-377)
- engineered mutation (410-411)
- expression tag (491)
Domains in SCOPe 2.06: d4oshb1, d4oshb2 - Chain 'G':
Compound: DNA (5'-d(*tp*gp*tp*cp*cp*cp*tp*tp*tp*ap*tp*cp*tp*cp*tp*cp*t)-3')
- Chain 'H':
Compound: DNA (5'-d(*ap*gp*ap*gp*ap*gp*ap*tp*ap*ap*ap*gp*gp*gp*ap*cp*a)-3')
- Chain 'I':
Compound: DNA (5'-d(*tp*gp*tp*cp*cp*cp*tp*tp*tp*ap*tp*cp*tp*cp*tp*cp*t)-3')
- Chain 'J':
Compound: DNA (5'-d(*ap*gp*ap*gp*ap*gp*ap*tp*ap*ap*ap*gp*gp*gp*ap*cp*a)-3')
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4oshA (A:)
mqwsgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnl
tpeqvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllp
vlcqahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqal
etvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaias
ngggkqaletvqrllpvlcqahgltpqqvvaiasniggkqaletvqrllpvlcqahgltp
qqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvl
cqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqalet
vqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalacl
ggrpaldavkklehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4oshA (A:)
wsgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnltp
eqvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvl
cqahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqalet
vqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasng
ggkqaletvqrllpvlcqahgltpqqvvaiasniggkqaletvqrllpvlcqahgltpqq
vvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvlcq
ahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqaletvq
rllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclgg
rpaldav
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4oshB (B:)
mqwsgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnl
tpeqvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllp
vlcqahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqal
etvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaias
ngggkqaletvqrllpvlcqahgltpqqvvaiasniggkqaletvqrllpvlcqahgltp
qqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvl
cqahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqalet
vqrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalacl
ggrpaldavkklehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4oshB (B:)
sgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnltpe
qvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvlc
qahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqaletv
qrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasngg
gkqaletvqrllpvlcqahgltpqqvvaiasniggkqaletvqrllpvlcqahgltpqqv
vaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvlcqa
hgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqaletvqr
llpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclggr
paldavkkl
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.