PDB entry 4oqp
View 4oqp on RCSB PDB site
Description: Structure of the effector-binding domain of deoxyribonucleoside regulator DeoR from Bacillus subtilis in complex with deoxyribose-5-phosphate
Class: transcription
Keywords: Rossmann Fold, Sugar-binding transcriptional regulator, Schiff base, Transcription
Deposited on
2014-02-10, released
2014-06-04
The last revision prior to the SCOPe 2.07 freeze date was dated
2014-10-01, with a file datestamp of
2014-09-26.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.156
AEROSPACI score: 0.54
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Deoxyribonucleoside regulator
Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
Gene: deoR, yxxC, BSU39430
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d4oqpa_ - Heterogens: PED, CD, NI, CO, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4oqpA (A:)
gidpftdpfedldalgsileekyglleahvvfsptpdyagithdlsrygaeymhetvkdg
divgvswgttmyqiaqnmqpkqvkgvevvqlkggishsrvntysaetiqlfaeafqtmpr
ylplpvvfdnadvkrmvekdrhieriiemgkqanialftvgtvrdeallfrlgyfneeek
allkkqavgdicsrffdakgnicssaindrtigvelqdlrlkersilvaggsrkvssihg
altgkyanvliidqhtaralvndl
Sequence, based on observed residues (ATOM records): (download)
>4oqpA (A:)
fedldalgsileekyglleahvvfsptpdyagithdlsrygaeymhetvkdgdivgvswg
ttmyqiaqnmqpkqvkgvevvqlkggishsrvntysaetiqlfaeafqtmprylplpvvf
dnadvkrmvekdrhieriiemgkqanialftvgtvrdeallfrlgyfneeekallkkqav
gdicsrffdakgnicssaindrtigvelqdlrlkersilvaggsrkvssihgaltgkyan
vliidqhtaralvn