PDB entry 4opd

View 4opd on RCSB PDB site
Description: Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase.
Deposited on 2014-02-05, released 2014-07-09
The last revision was dated 2014-07-23, with a file datestamp of 2014-07-18.
Experiment type: XRAY
Resolution: 1.81 Å
R-factor: 0.146
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Conserved archaeal protein
    Species: Sulfolobus acidocaldarius [TaxId:330779]
    Gene: Saci_0986
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Conserved archaeal protein
    Species: Sulfolobus acidocaldarius [TaxId:330779]
    Gene: Saci_0986
    Database cross-references and differences (RAF-indexed):
  • Heterogens: FDA, GRG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4opdA (A:)
hmkelkydvliigggfagssaayqlsrrglkillvdskpwnrigdkpcgdavskahfdkl
gmpypkgeelenkingiklyspdmqtvwtvngegfelnaplynqrvlkeaqdrgveiwdl
ttamkpifedgyvkgavlfnrrtneeltvyskvvveatgysrsfrsklppelpitedldd
kdadvayrevlltkediedhdylrifidqetspggywwyfpkgknkvnvglgiqggmgyp
siheyykkyldkyapdvdkskllvkggalvptrrplytmawngiivigdsgftvnpvhgg
gkgsamisgycaakailsafetgdfsasglwdmnicyvneygakqasldifrrflqklsn
ddinygmkkkiikeedlleasekgdlhlsvadkamrvisglgrpsllfklkavaesmkki
kelylnyprspsslgswrrevdnvltefnksls

    Sequence, based on observed residues (ATOM records):
    >4opdA (A:)
mkelkydvliigggfagssaayqlsrrglkillvdskpwnrigdkpcgdavskahfdklg
mpypkgeelenkingiklyspdmqtvwtvngegfelnaplynqrvlkeaqdrgveiwdlt
tamkpifedgyvkgavlfnrrtneeltvyskvvveatgysrsfrsklppelpitedlddk
dadvayrevlltkediedhdylrifidqetspggywwyfpkgknkvnvglgiqggmgyps
iheyykkyldkyapdvdkskllvkggalvptrrplytmawngiivigdsgftvnpvhggg
kgsamisgycaakailsafetgdfsasglwdmnicyvneygakqasldifrrflqklsnd
dinygmkkkiikeedlleasekgdlhlsvadkamrvisglgrpsllfklkavaesmkkik
elylnyprspsslgswrrevdnvltefnksls

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4opdB (B:)
hmkelkydvliigggfagssaayqlsrrglkillvdskpwnrigdkpcgdavskahfdkl
gmpypkgeelenkingiklyspdmqtvwtvngegfelnaplynqrvlkeaqdrgveiwdl
ttamkpifedgyvkgavlfnrrtneeltvyskvvveatgysrsfrsklppelpitedldd
kdadvayrevlltkediedhdylrifidqetspggywwyfpkgknkvnvglgiqggmgyp
siheyykkyldkyapdvdkskllvkggalvptrrplytmawngiivigdsgftvnpvhgg
gkgsamisgycaakailsafetgdfsasglwdmnicyvneygakqasldifrrflqklsn
ddinygmkkkiikeedlleasekgdlhlsvadkamrvisglgrpsllfklkavaesmkki
kelylnyprspsslgswrrevdnvltefnksls

    Sequence, based on observed residues (ATOM records):
    >4opdB (B:)
mkelkydvliigggfagssaayqlsrrglkillvdskpwnrigdkpcgdavskahfdklg
mpypkgeelenkingiklyspdmqtvwtvngegfelnaplynqrvlkeaqdrgveiwdlt
tamkpifedgyvkgavlfnrrtneeltvyskvvveatgysrsfrsklppelpitedlddk
dadvayrevlltkediedhdylrifidqetspggywwyfpkgknkvnvglgiqggmgyps
iheyykkyldkyapdvdkskllvkggalvptrrplytmawngiivigdsgftvnpvhggg
kgsamisgycaakailsafetgdfsasglwdmnicyvneygakqasldifrrflqklsnd
dinygmkkkiikeedlleasekgdlhlsvadkamrvisglgrpsllfklkavaesmkkik
elylnyprspsslgswrrevdnvltefnksls