PDB entry 4oov

View 4oov on RCSB PDB site
Description: Crystal structure of P domain from norovirus strain Farmington Hills 2004
Class: viral protein
Keywords: VIRAL CAPSID PROTEIN, Protruding Domain, VIRAL PROTEIN
Deposited on 2014-02-04, released 2014-12-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-02-11, with a file datestamp of 2015-02-06.
Experiment type: XRAY
Resolution: 1.53 Å
R-factor: 0.146
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Major capsid protein
    Species: Norovirus Hu/GII.4/Farmington Hills/2004/USA [TaxId:1182143]
    Gene: JQ478408
    Database cross-references and differences (RAF-indexed):
    • Uniprot R4I4P2 (1-306)
      • expression tag (0)
    Domains in SCOPe 2.08: d4oova1, d4oova2
  • Chain 'B':
    Compound: Major capsid protein
    Species: Norovirus Hu/GII.4/Farmington Hills/2004/USA [TaxId:1182143]
    Gene: JQ478408
    Database cross-references and differences (RAF-indexed):
    • Uniprot R4I4P2 (1-306)
      • expression tag (0)
    Domains in SCOPe 2.08: d4oovb1, d4oovb2
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4oovA (A:)
skpftvpiltveemtnsrfpipleklftgpsgafvvqpqngrcttdgvllgttqlspvni
ctfrgdvthiagthnytmnlasqnwnnydpteeipaplgtpdfvgriqgmltqttrgdgs
trghkatvstgdvhftpklgsiqfntdtnndfetgqntkftpvgvvqdgngahqnepqqw
vlpsysgrtghnvhlapavaptfpgeqllffrstmpgcsgypnmnldcllpqewvqhfyq
eaapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvnq
fytlapm

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4oovB (B:)
skpftvpiltveemtnsrfpipleklftgpsgafvvqpqngrcttdgvllgttqlspvni
ctfrgdvthiagthnytmnlasqnwnnydpteeipaplgtpdfvgriqgmltqttrgdgs
trghkatvstgdvhftpklgsiqfntdtnndfetgqntkftpvgvvqdgngahqnepqqw
vlpsysgrtghnvhlapavaptfpgeqllffrstmpgcsgypnmnldcllpqewvqhfyq
eaapaqsdvallrfvnpdtgrvlfecklhksgyvtvahtgqhdlvippngyfrfdswvnq
fytlapm