PDB entry 4ong

View 4ong on RCSB PDB site
Description: fab fragment of 3d6 in complex with amyloid beta 1-40
Deposited on 2014-01-28, released 2014-06-11
The last revision was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: 3d6 fab antibody heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4ONG (0-End)
  • Chain 'L':
    Compound: 3d6 fab antibody light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4ONG (0-End)
  • Chain 'P':
    Compound: amyloid beta a4 protein
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN, IMD, CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4ongH (H:)
evklvesggglvkpgaslklscaasgftfsnygmswvrqnsdkrlewvasirsgggrtyy
sdnvkgrftisrenakntlylqmsslksedtalyycvrydhysgssdywgqgttvtvssa
kttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdl
ytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdcg

    Sequence, based on observed residues (ATOM records):
    >4ongH (H:)
evklvesggglvkpgaslklscaasgftfsnygmswvrqnsdkrlewvasirsgggrtyy
sdnvkgrftisrenakntlylqmsslksedtalyycvrydsgssdywgqgttvtvssakt
tppsvyplapsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtv
psstwpsetvtcnvahpasstkvdkkivpr

  • Chain 'L':
    Sequence, based on SEQRES records:
    >4ongL (L:)
yvvmtqtpltlsvtigqpasisckssqslldsdgktylnwllqrpgqspkrliylvskld
sgvpdrftgsgsgtdftlkisrieaedlglyycwqgthfprtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrnec

    Sequence, based on observed residues (ATOM records):
    >4ongL (L:)
yvvmtqtpltlsvtigqpasisckssqslldsdgktylnwllqrpgqspkrliylvskld
sgvpdrftgsgsgtdftlkisrieaedlglyycwqgthfprtfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktspivksfnr

  • Chain 'P':
    Sequence, based on SEQRES records:
    >4ongP (P:)
daefrhdsgyevhhqklvffaedvgsnkgaiiglmvggvv

    Sequence, based on observed residues (ATOM records):
    >4ongP (P:)
daefr