PDB entry 4ojc

View 4ojc on RCSB PDB site
Description: crystal structure of the wild-type full-length trimeric ectodomain of the c. elegans fusion protein eff-1
Deposited on 2014-01-21, released 2014-05-14
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.93 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: eff-1a
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: C26D10.5, CELE_C26D10.5, eff-1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4ojcA (A:)
    rsfpleekfdglfraepphcsktpivraqtsqnamssiargmqmqfsiglhtavcfrlye
    dtqlasqeinddenagnqtsllhtirleklehhhpitqrytfgipevhascicecdatss
    tctaeshqftacpesdksdetsscyrtffpnqtpigcseddipklccdvrfkpyknmtfl
    avkleqpttyatfvyaaydfvngywvekdktkirsqldggtqdrhldqkrrislavtagg
    rashqletgmyfsrtsnggeteelrmqplneitdnnfdrlgwyrmddsghfhvnngvvkm
    ddihkakvknckeqtyksilsanhympghfnltrplevikpwiqsarifdsslrqavvth
    aegtnlqisihlddevesqnlvffhnasrirdfsgsiivdsksnrlfnltvyeasgkidg
    svkmstgfgsdtihtftayvsdlhasnrsmiiplpaivgqgaraiclradsmadidkich
    vieyfespleidlvegkwhemigtcptcnqinfngmmkflnpahwikgissigdgvmiat
    dgpfeddddkagwshpqfekgggsgggsgggswshpqfek
    

    Sequence, based on observed residues (ATOM records):
    >4ojcA (A:)
    raepphcsktpivraqtsqnamsrgmqmqfsiglhtavcfrlyllhtirleklehhhpit
    qrytfgipevhascicecdatsstctaeshqftacpesdksdetsscyrtffpnqtpigc
    seddipklccdvrfkpyknmtflavkleqpttyatfvyaaydfvngywvekdktkirsql
    dggtqdrhldqkrrislavtaggrashqletgmyfsrtsneteelrmqplneitdnnfdr
    lgwyrmddsghfhvnngvvkmddihkakvknckeqtyksilsanhympghfnltrplevi
    kpwiqsarifdsslrqavvthaegtnlqisihlesqnlvffhnasrirdfsgsiivdsks
    nrlfnltvyeasgkidgsvkmstgfgsdtihtftayvsdlhasnrsmiiplpaivgqgar
    aiclradsmadidkichvieyfesplikgissigdgvmiat