SCOPe 2.08: Structural Classification of Proteins

PDB entry 4oj0

View 4oj0 on RCSB PDB site
Description: mCardinal V218E
Class: fluorescent protein
Keywords: fluorescent protein
Deposited on 2014-01-20, released 2014-03-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-05-14, with a file datestamp of 2014-05-09.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.165
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Fluorescent protein FP480
Species: Entacmaea quadricolor [TaxId:6118]
Database cross-references and differences (RAF-indexed):
- Uniprot D0VX33 (8-End)
  - expression tag (7)
  - conflict (11)
  - conflict (15)
  - conflict (33)
  - conflict (66)
  - chromophore (68)
  - conflict (72)
  - conflict (76)
  - conflict (78-79)
  - conflict (85)
  - conflict (109)
  - conflict (126)
  - conflict (148)
  - conflict (151)
  - conflict (163)
  - conflict (165)
  - conflict (170)
  - conflict (176)
  - conflict (179)
  - conflict (190)
  - conflict (199)
  - conflict (202)
  - conflict (212)
  - engineered mutation (223)
Domains in SCOPe 2.08: d4oj0a1, d4oj0a2
Chain 'B':
Compound: Fluorescent protein FP480
Species: Entacmaea quadricolor [TaxId:6118]
Database cross-references and differences (RAF-indexed):
- Uniprot D0VX33 (8-End)
  - expression tag (7)
  - conflict (11)
  - conflict (15)
  - conflict (33)
  - conflict (66)
  - chromophore (68)
  - conflict (72)
  - conflict (76)
  - conflict (78-79)
  - conflict (85)
  - conflict (109)
  - conflict (126)
  - conflict (148)
  - conflict (151)
  - conflict (163)
  - conflict (165)
  - conflict (170)
  - conflict (176)
  - conflict (179)
  - conflict (190)
  - conflict (199)
  - conflict (202)
  - conflict (212)
  - engineered mutation (223)
Domains in SCOPe 2.08: d4oj0b1, d4oj0b2
Chain 'C':
Compound: Fluorescent protein FP480
Species: Entacmaea quadricolor [TaxId:6118]
Database cross-references and differences (RAF-indexed):
- Uniprot D0VX33 (8-End)
  - expression tag (7)
  - conflict (11)
  - conflict (15)
  - conflict (33)
  - conflict (66)
  - chromophore (68)
  - conflict (72)
  - conflict (76)
  - conflict (78-79)
  - conflict (85)
  - conflict (109)
  - conflict (126)
  - conflict (148)
  - conflict (151)
  - conflict (163)
  - conflict (165)
  - conflict (170)
  - conflict (176)
  - conflict (179)
  - conflict (190)
  - conflict (199)
  - conflict (202)
  - conflict (212)
  - engineered mutation (223)
Domains in SCOPe 2.08: d4oj0c1, d4oj0c2
Chain 'D':
Compound: Fluorescent protein FP480
Species: Entacmaea quadricolor [TaxId:6118]
Database cross-references and differences (RAF-indexed):
- Uniprot D0VX33 (8-End)
  - expression tag (7)
  - conflict (11)
  - conflict (15)
  - conflict (33)
  - conflict (66)
  - chromophore (68)
  - conflict (72)
  - conflict (76)
  - conflict (78-79)
  - conflict (85)
  - conflict (109)
  - conflict (126)
  - conflict (148)
  - conflict (151)
  - conflict (163)
  - conflict (165)
  - conflict (170)
  - conflict (176)
  - conflict (179)
  - conflict (190)
  - conflict (199)
  - conflict (202)
  - conflict (212)
  - engineered mutation (223)
Domains in SCOPe 2.08: d4oj0d1, d4oj0d2
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>4oj0A (A:)
dpmvskgeelikenmpmklymegtvnnhhfkcttegegkpyegtqtqrikvveggplpfa
fdilatcfmygsktfikhpkgipdffkqsfpegftwervttyedggvltvtqdtslqdgc
liynvklrgvnfpsngpvmqkktlgweattetlypadgglegrcdmalkldggghlhcnl
kttyrskkpagnlkmpgvyfvdrrlerikeadnetyveqhevaearycdlpsklghklng
mdelyk

Sequence, based on observed residues (ATOM records): (download)

>4oj0A (A:)
eelikenmpmklymegtvnnhhfkcttegegkpyegtqtqrikvveggplpfafdilatc
fmygsktfikhpkgipdffkqsfpegftwervttyedggvltvtqdtslqdgcliynvkl
rgvnfpsngpvmqkktlgweattetlypadgglegrcdmalkldggghlhcnlkttyrsk
kpagnlkmpgvyfvdrrlerikeadnetyveqhevaearycdlpskl

Chain 'B':
Sequence, based on SEQRES records: (download)

>4oj0B (B:)
dpmvskgeelikenmpmklymegtvnnhhfkcttegegkpyegtqtqrikvveggplpfa
fdilatcfmygsktfikhpkgipdffkqsfpegftwervttyedggvltvtqdtslqdgc
liynvklrgvnfpsngpvmqkktlgweattetlypadgglegrcdmalkldggghlhcnl
kttyrskkpagnlkmpgvyfvdrrlerikeadnetyveqhevaearycdlpsklghklng
mdelyk

Sequence, based on observed residues (ATOM records): (download)

>4oj0B (B:)
eelikenmpmklymegtvnnhhfkcttegegkpyegtqtqrikvveggplpfafdilatc
fmygsktfikhpkgipdffkqsfpegftwervttyedggvltvtqdtslqdgcliynvkl
rgvnfpsngpvmqkktlgweattetlypadgglegrcdmalkldggghlhcnlkttyrsk
kpagnlkmpgvyfvdrrlerikeadnetyveqhevaearycdlpskl

Chain 'C':
Sequence, based on SEQRES records: (download)

>4oj0C (C:)
dpmvskgeelikenmpmklymegtvnnhhfkcttegegkpyegtqtqrikvveggplpfa
fdilatcfmygsktfikhpkgipdffkqsfpegftwervttyedggvltvtqdtslqdgc
liynvklrgvnfpsngpvmqkktlgweattetlypadgglegrcdmalkldggghlhcnl
kttyrskkpagnlkmpgvyfvdrrlerikeadnetyveqhevaearycdlpsklghklng
mdelyk

Sequence, based on observed residues (ATOM records): (download)

>4oj0C (C:)
eelikenmpmklymegtvnnhhfkcttegegkpyegtqtqrikvveggplpfafdilatc
fmygsktfikhpkgipdffkqsfpegftwervttyedggvltvtqdtslqdgcliynvkl
rgvnfpsngpvmqkktlgweattetlypadgglegrcdmalkldggghlhcnlkttyrsk
kpagnlkmpgvyfvdrrlerikeadnetyveqhevaearycdlpskl

Chain 'D':
Sequence, based on SEQRES records: (download)

>4oj0D (D:)
dpmvskgeelikenmpmklymegtvnnhhfkcttegegkpyegtqtqrikvveggplpfa
fdilatcfmygsktfikhpkgipdffkqsfpegftwervttyedggvltvtqdtslqdgc
liynvklrgvnfpsngpvmqkktlgweattetlypadgglegrcdmalkldggghlhcnl
kttyrskkpagnlkmpgvyfvdrrlerikeadnetyveqhevaearycdlpsklghklng
mdelyk

Sequence, based on observed residues (ATOM records): (download)

>4oj0D (D:)
eelikenmpmklymegtvnnhhfkcttegegkpyegtqtqrikvveggplpfafdilatc
fmygsktfikhpkgipdffkqsfpegftwervttyedggvltvtqdtslqdgcliynvkl
rgvnfpsngpvmqkktlgweattetlypadgglegrcdmalkldggghlhcnlkttyrsk
kpagnlkmpgvyfvdrrlerikeadnetyveqhevaearycdlpskl