PDB entry 4oi1

View 4oi1 on RCSB PDB site
Description: clp1 bound to ssrna dinucleotide gc, adp, alf4-, and mg2+(transition state, data set ii)
Deposited on 2014-01-18, released 2014-05-14
The last revision was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein clpf-1
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: clpf-1, F59A2.4
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: RNA (5'-r(*gp*c)-3')
    Species: synthetic, synthetic
  • Heterogens: ADP, MG, ALF, 2PE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4oi1A (A:)
gshmseenvqefvlkedcelrfaagddsdvclelvkgyaeifgtelllnkkytfpaksrv
aaftwkgatielvgttesayvaestpmviylnihaameevrkkreeqaagnsnkakgprl
llvgptdvgkttvsrilcnysvrqgrtpifveldvgqnsvsvpgtvaavlvqktadvidg
fernqpivfnfghtspsanlslyealfkemattlnaqiqendeakiggmiintcgwvdge
gykcivkaasafevdvvivldherlysdlskelpefvrlthvpksggveqrtgqirskmr
genvhryfygtrannlypftfdvsfddvtlckigaeqlpdsclpfgmevenhetklvime
psadikhhlfafsrstkadenvlkspvfgfclvtevdlekrtmsilcpqrtipskvlvfs
dithlddqikr

    Sequence, based on observed residues (ATOM records):
    >4oi1A (A:)
envqefvlkedcelrfaagddsdvclelvkgyaeifgtelllnkkytfpaksrvaaftwk
gatielvgttesayvaestpmviylnihaameevrkkreeqakakgprlllvgptdvgkt
tvsrilcnysvrqgrtpifveldvgqnsvsvpgtvaavlvqktadvidgfernqpivfnf
ghtspsanlslyealfkemattlnaqiqendeakiggmiintcgwvdgegykcivkaasa
fevdvvivldherlysdlskelpefvrlthvpksggveqrtgqirskmrgenvhryfygt
rannlypftfdvsfddvtlckigklvimepsadikhhlfafsrstkadenvlkspvfgfc
lvtevdlekrtmsilcpqrtipskvlvfsdithld

  • Chain 'B':
    No sequence available.