PDB entry 4ohy

View 4ohy on RCSB PDB site
Description: c. elegans clp1 bound to ssrna dinucleotide gc, amp-pnp, and mg2+(inhibited substrate bound state)
Deposited on 2014-01-18, released 2014-05-14
The last revision was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein clpf-1
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: clpf-1, F59A2.4
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: RNA (5'-r(*gp*c)-3')
    Species: synthetic, synthetic
  • Heterogens: ANP, MG, 2PE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4ohyA (A:)
gshmseenvqefvlkedcelrfaagddsdvclelvkgyaeifgtelllnkkytfpaksrv
aaftwkgatielvgttesayvaestpmviylnihaameevrkkreeqaagnsnkakgprl
llvgptdvgkttvsrilcnysvrqgrtpifveldvgqnsvsvpgtvaavlvqktadvidg
fernqpivfnfghtspsanlslyealfkemattlnaqiqendeakiggmiintcgwvdge
gykcivkaasafevdvvivldherlysdlskelpefvrlthvpksggveqrtgqirskmr
genvhryfygtrannlypftfdvsfddvtlckigaeqlpdsclpfgmevenhetklvime
psadikhhlfafsrstkadenvlkspvfgfclvtevdlekrtmsilcpqrtipskvlvfs
dithlddqikr

    Sequence, based on observed residues (ATOM records):
    >4ohyA (A:)
eenvqefvlkedcelrfaagddsdvclelvkgyaeifgtelllnkkytfpaksrvaaftw
kgatielvgttesayvaestpmviylnihaameevrkkreeqakakgprlllvgptdvgk
ttvsrilcnysvrqgrtpifveldvgqnsvsvpgtvaavlvqktadvidgfernqpivfn
fghtspsanlslyealfkemattlnaqiqendeakiggmiintcgwvdgegykcivkaas
afevdvvivldherlysdlskelpefvrlthvpksggveqrtgqirskmrgenvhryfyg
trannlypftfdvsfddvtlckigetklvimepsadikhhlfafsrstkadenvlkspvf
gfclvtevdlekrtmsilcpqrtipskvlvfsdithld

  • Chain 'B':
    No sequence available.