PDB entry 4ofv

View 4ofv on RCSB PDB site
Description: refinement of rage-dna complex in 3s58 without dna
Deposited on 2014-01-15, released 2014-04-23
The last revision was dated 2017-11-22, with a file datestamp of 2017-11-17.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Advanced glycosylation end product-specific receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: AGER, RAGE
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Advanced glycosylation end product-specific receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: AGER, RAGE
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q15109 (4-216)
      • expression tag (2-3)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4ofvA (A:)
gsvdaqnitarigeplvlkckgapkkppqrlewklntgrteawkvlspqgggpwdsvarv
lpngslflpavgiqdegifrcqamnrngketksnyrvrvyqipgkpeivdsaseltagvp
nkvgtcvsegsypagtlswhldgkplvpnekgvsvkeqtrrhpetglftlqselmvtpar
ggdprptfscsfspglprhralrtapiqprvwepvpleeaaas

    Sequence, based on observed residues (ATOM records):
    >4ofvA (A:)
aqnitarigeplvlkckgapkkppqrlewklntgrteawkvlspqgggpwdsvarvlpng
slflpavgiqdegifrcqamnrngketksnyrvrvyqipgkpeivdsaseltagvpnkvg
tcvsegsypagtlswhldgkplvpnekgvsvkeqtrrhpetglftlqselmvtparggdp
rptfscsfspglprhralrtapiqprvwepv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4ofvB (B:)
gsvdaqnitarigeplvlkckgapkkppqrlewklntgrteawkvlspqgggpwdsvarv
lpngslflpavgiqdegifrcqamnrngketksnyrvrvyqipgkpeivdsaseltagvp
nkvgtcvsegsypagtlswhldgkplvpnekgvsvkeqtrrhpetglftlqselmvtpar
ggdprptfscsfspglprhralrtapiqprvwepvpleeaaas

    Sequence, based on observed residues (ATOM records):
    >4ofvB (B:)
vdaqnitarigeplvlkckgapkkppqrlewklntgrteawkvlspqgggpwdsvarvlp
ngslflpavgiqdegifrcqamnrngketksnyrvrvyqipgkpeivdsaseltagvpnk
vgtcvsegsypagtlswhldgkplvpnekgvsvkeqtrrhpetglftlqselmvtpargg
dprptfscsfspglprhralrtapiqprvwepvpl