PDB entry 4ofi

View 4ofi on RCSB PDB site
Description: crystal structure of duf (kirre) d1
Deposited on 2014-01-14, released 2014-02-19
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Kin of irre, isoform A
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3653, Dmel_CG3653, Duf (Kirre), kirre
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Kin of irre, isoform A
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3653, Dmel_CG3653, Duf (Kirre), kirre
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Kin of irre, isoform A
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3653, Dmel_CG3653, Duf (Kirre), kirre
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9W4T9 (3-107)
      • expression tag (108)
  • Chain 'D':
    Compound: Kin of irre, isoform A
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3653, Dmel_CG3653, Duf (Kirre), kirre
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Kin of irre, isoform A
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3653, Dmel_CG3653, Duf (Kirre), kirre
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Kin of irre, isoform A
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3653, Dmel_CG3653, Duf (Kirre), kirre
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Kin of irre, isoform A
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3653, Dmel_CG3653, Duf (Kirre), kirre
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9W4T9 (3-107)
      • expression tag (108)
  • Chain 'H':
    Compound: Kin of irre, isoform A
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: CG3653, Dmel_CG3653, Duf (Kirre), kirre
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NA, NAG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >4ofiA (A:)
adpgqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvg
sdeegdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvphhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4ofiA (A:)
gqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvgsde
egdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvp

  • Chain 'B':
    Sequence, based on SEQRES records:
    >4ofiB (B:)
adpgqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvg
sdeegdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvphhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4ofiB (B:)
gqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvgsde
egdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >4ofiC (C:)
adpgqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvg
sdeegdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvphhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4ofiC (C:)
gqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvgsde
egdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvph

  • Chain 'D':
    Sequence, based on SEQRES records:
    >4ofiD (D:)
adpgqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvg
sdeegdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvphhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4ofiD (D:)
gqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvgsde
egdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvp

  • Chain 'E':
    Sequence, based on SEQRES records:
    >4ofiE (E:)
adpgqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvg
sdeegdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvphhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4ofiE (E:)
gqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvgsde
egdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvp

  • Chain 'F':
    Sequence, based on SEQRES records:
    >4ofiF (F:)
adpgqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvg
sdeegdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvphhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4ofiF (F:)
gqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvgsde
egdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvp

  • Chain 'G':
    Sequence, based on SEQRES records:
    >4ofiG (G:)
adpgqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvg
sdeegdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvphhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4ofiG (G:)
gqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvgsde
egdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvph

  • Chain 'H':
    Sequence, based on SEQRES records:
    >4ofiH (H:)
adpgqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvg
sdeegdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvphhhhhhh

    Sequence, based on observed residues (ATOM records):
    >4ofiH (H:)
gqhfamepqdqtavvgsrvtlpcrvmekvgalqwtkddfglgqhrnlsgferysmvgsde
egdfsldiyplmldddakyqcqvgpgpqgeqgirsrfakltvlvp