PDB entry 4oeh

View 4oeh on RCSB PDB site
Description: X-ray Structure of Uridine Phosphorylase from Vibrio cholerae Complexed with Uracil at 1.91 A Resolution
Class: transferase
Keywords: Rossmann fold, Transferase, Nucleoside
Deposited on 2014-01-13, released 2015-03-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-03-07, with a file datestamp of 2018-03-02.
Experiment type: XRAY
Resolution: 1.91 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uridine phosphorylase
    Species: Vibrio cholerae O1 biovar El Tor [TaxId:243277]
    Gene: udp, VC_1034
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4oeha_
  • Chain 'B':
    Compound: Uridine phosphorylase
    Species: Vibrio cholerae O1 biovar El Tor [TaxId:243277]
    Gene: udp, VC_1034
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4oehb_
  • Chain 'C':
    Compound: Uridine phosphorylase
    Species: Vibrio cholerae O1 biovar El Tor [TaxId:243277]
    Gene: udp, VC_1034
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4oehc_
  • Chain 'D':
    Compound: Uridine phosphorylase
    Species: Vibrio cholerae O1 biovar El Tor [TaxId:243277]
    Gene: udp, VC_1034
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4oehd_
  • Chain 'E':
    Compound: Uridine phosphorylase
    Species: Vibrio cholerae O1 biovar El Tor [TaxId:243277]
    Gene: udp, VC_1034
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4oehe_
  • Chain 'F':
    Compound: Uridine phosphorylase
    Species: Vibrio cholerae O1 biovar El Tor [TaxId:243277]
    Gene: udp, VC_1034
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4oehf_
  • Heterogens: URA, GOL, EDO, EOH, PEG, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4oehA (A:)
    mtktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqs
    vvvcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgasl
    hfapmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfq
    gsmkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketears
    ikvvveaarkmlk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4oehA (A:)
    ktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqsvv
    vcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgaslhf
    apmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfqgs
    mkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketearsik
    vvveaarkmlk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4oehB (B:)
    mtktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqs
    vvvcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgasl
    hfapmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfq
    gsmkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketears
    ikvvveaarkmlk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4oehB (B:)
    tktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqsv
    vvcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgaslh
    fapmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfqg
    smkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketearsi
    kvvveaarkmlk
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4oehC (C:)
    mtktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqs
    vvvcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgasl
    hfapmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfq
    gsmkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketears
    ikvvveaarkmlk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4oehC (C:)
    ktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqsvv
    vcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgaslhf
    apmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfqgs
    mkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketearsik
    vvveaarkmlk
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4oehD (D:)
    mtktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqs
    vvvcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgasl
    hfapmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfq
    gsmkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketears
    ikvvveaarkmlk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4oehD (D:)
    ktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqsvv
    vcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgaslhf
    apmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfqgs
    mkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkepdhatlketearsikv
    vveaarkmlk
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4oehE (E:)
    mtktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqs
    vvvcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgasl
    hfapmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfq
    gsmkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketears
    ikvvveaarkmlk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4oehE (E:)
    ktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqsvv
    vcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgaslhf
    apmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfqgs
    mkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketearsik
    vvveaarkmlk
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4oehF (F:)
    mtktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqs
    vvvcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgasl
    hfapmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfq
    gsmkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketears
    ikvvveaarkmlk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4oehF (F:)
    ktvfhlgvteadlngatlaiipgdparvqkiaelmdnpvflashreytvyraeldgqsvv
    vcstgiggpstsiaveelaqlgvrtflrvgttgaiqphvnvgdmivttgsvrldgaslhf
    apmefpavpdfdvatamkaaaqesgatvhmgvtassdtfypgqerydtftgrvvrrfqgs
    mkewqdmgvlnfemesatlltmcassglkagcvagviinrtqkeipdhatlketearsik
    vvveaarkmlk